Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2293 |
Symbol | |
ID | 1221138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2485952 |
End bp | 2487532 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238692 |
Product | hypothetical protein |
Protein accession | NP_520414 |
Protein GI | 17547012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.289828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCTCG CCATGCCGGC GGGCCAGGCG GGCAGTGCGT CGGCGGCGGA TCCGGGCGAG GCGATCTTCC GTGAGGGCGT GCTGCCCTCC GGTGCGCCGC TGGTCGCCAC GCGCGACGGC GGCATGCGCA TGGAGGGCGC GGCGGGAGCC TGTGTCAACT GCCACCGGCG CAGCGGGCTG GGCGCGAGAT CCGGCCTGTC CAGCATTCCG CCGATCACCG GGCGGTACTT GTTCCATCCG CCTGCCAAAA GCGGCGAGGA CCGCGGCATT CCCTACGTCG AGACCATGCG CGGCGACCGC GAGCCGTATA CCGATGCGAC GCTGGCGCGG GCGATCCGCG ACGGGATCGA TTCGCAGGGG CGGCCGATGC GCTACCTGAT GCCGCATTTC ACGCTGGGCG ATGGCGACAT GGCGGCCCTG ATCGCCTATC TGAAGCGGCT CGACCCGCGC CGCGCACCCG GCGTGGGCAG CGGCGTGCTG CATTTCGCCA CCATCATCAC GCCCGACGCC GATCCCGTGA AGCGCCGCGG CATGCTCGAT GTGCTGGAGC ACTACGTGGC CGAGAAGAAC GCCTTCCCGC TGGGCGCGAC GCCGCCGCTG CGCGCATCGC GCAAGATGAT GTACATGGTC AACCGCCAAT GGCAGCTGCA CGTCTGGGAA CTGAGCGGCC CGCCGCAGAC ATGGGAGGCG CAGCTCGAGC AGCATCTGGC CGCCGAACCG GTCTTTGCCG TGGTGTCGGG GCTGGGCGGC AAGAACTGGG CACCGGTGAG CGCGTTCTGC GAGCGCGCGG CCGTGCCGTG CCTGTTCCCG AACGTCGAGG CACCGGACAT CGGCCACGGC GATTTCTACG CGCTGTATTT CTCGCGCGGC GTGCGGCTCG AAGCCGGCTT GCTGGCCGCC GGCGTTGCCG ACGCGATGCG CGGTGGCGCG CTCAAGGCGG TGCACCAGGT CTACCGGAGC GGCGACACCG GCGAAGCCGG CGCACAGGCA TTGGCGCAGG CGCTGCGGAG CCAGGGCATC GATGTCTCGA GCCACGCGCT GGCGCCGGGC GAGCGCCTCG CCAAGGCATT CGTCGGCATG TCGAAGGACG ATGCCCTGGT GCTCTGGCTG CGCCCGGCCG ATCTCGCCGC CCTGGGCAAG ACCGTGCCCA CGCAGACCGT GTTCATGTCG GGGCTCATGG GCGGCCTCGA GCGCGCGCCG TTGCCGGCGC TCTGGCGTGA CGTGACGCGC ATTGCCTATC CGTTCGACCT GCCGGAGCGC CGGCGTGTGC GCGTCGACTA CGCGCTCGGG TGGTTCGCCA TCCGGCATAT CCCGGTGGTC GATGAACAGG TGCAGGCCGA CACCTTCCTG GCCTGCGGGC TGCTCGCCGA GACCCTGAGC CATATGGCCG ATACGTTCGT GCGCGACTAC CTCGTGGAGC GCATCGAGGA CATGCTCGAG CGCCGCGTGA TCACCGGCTA CTACCCGCGC CTGACCCTCG CGCCGGGGCA GCGTTTCGCG TCGAAGGGCG GCTACCTGGT GCACTTTGCC GACGCCGGCG GAACCCGGAT CGTGGCGGAC GGCGACTGGA TCGTGCCTTA G
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Protein sequence | MCLAMPAGQA GSASAADPGE AIFREGVLPS GAPLVATRDG GMRMEGAAGA CVNCHRRSGL GARSGLSSIP PITGRYLFHP PAKSGEDRGI PYVETMRGDR EPYTDATLAR AIRDGIDSQG RPMRYLMPHF TLGDGDMAAL IAYLKRLDPR RAPGVGSGVL HFATIITPDA DPVKRRGMLD VLEHYVAEKN AFPLGATPPL RASRKMMYMV NRQWQLHVWE LSGPPQTWEA QLEQHLAAEP VFAVVSGLGG KNWAPVSAFC ERAAVPCLFP NVEAPDIGHG DFYALYFSRG VRLEAGLLAA GVADAMRGGA LKAVHQVYRS GDTGEAGAQA LAQALRSQGI DVSSHALAPG ERLAKAFVGM SKDDALVLWL RPADLAALGK TVPTQTVFMS GLMGGLERAP LPALWRDVTR IAYPFDLPER RRVRVDYALG WFAIRHIPVV DEQVQADTFL ACGLLAETLS HMADTFVRDY LVERIEDMLE RRVITGYYPR LTLAPGQRFA SKGGYLVHFA DAGGTRIVAD GDWIVP
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