Gene RSc2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2293 
Symbol 
ID1221138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2485952 
End bp2487532 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content70% 
IMG OID637238692 
Producthypothetical protein 
Protein accessionNP_520414 
Protein GI17547012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.289828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTCG CCATGCCGGC GGGCCAGGCG GGCAGTGCGT CGGCGGCGGA TCCGGGCGAG 
GCGATCTTCC GTGAGGGCGT GCTGCCCTCC GGTGCGCCGC TGGTCGCCAC GCGCGACGGC
GGCATGCGCA TGGAGGGCGC GGCGGGAGCC TGTGTCAACT GCCACCGGCG CAGCGGGCTG
GGCGCGAGAT CCGGCCTGTC CAGCATTCCG CCGATCACCG GGCGGTACTT GTTCCATCCG
CCTGCCAAAA GCGGCGAGGA CCGCGGCATT CCCTACGTCG AGACCATGCG CGGCGACCGC
GAGCCGTATA CCGATGCGAC GCTGGCGCGG GCGATCCGCG ACGGGATCGA TTCGCAGGGG
CGGCCGATGC GCTACCTGAT GCCGCATTTC ACGCTGGGCG ATGGCGACAT GGCGGCCCTG
ATCGCCTATC TGAAGCGGCT CGACCCGCGC CGCGCACCCG GCGTGGGCAG CGGCGTGCTG
CATTTCGCCA CCATCATCAC GCCCGACGCC GATCCCGTGA AGCGCCGCGG CATGCTCGAT
GTGCTGGAGC ACTACGTGGC CGAGAAGAAC GCCTTCCCGC TGGGCGCGAC GCCGCCGCTG
CGCGCATCGC GCAAGATGAT GTACATGGTC AACCGCCAAT GGCAGCTGCA CGTCTGGGAA
CTGAGCGGCC CGCCGCAGAC ATGGGAGGCG CAGCTCGAGC AGCATCTGGC CGCCGAACCG
GTCTTTGCCG TGGTGTCGGG GCTGGGCGGC AAGAACTGGG CACCGGTGAG CGCGTTCTGC
GAGCGCGCGG CCGTGCCGTG CCTGTTCCCG AACGTCGAGG CACCGGACAT CGGCCACGGC
GATTTCTACG CGCTGTATTT CTCGCGCGGC GTGCGGCTCG AAGCCGGCTT GCTGGCCGCC
GGCGTTGCCG ACGCGATGCG CGGTGGCGCG CTCAAGGCGG TGCACCAGGT CTACCGGAGC
GGCGACACCG GCGAAGCCGG CGCACAGGCA TTGGCGCAGG CGCTGCGGAG CCAGGGCATC
GATGTCTCGA GCCACGCGCT GGCGCCGGGC GAGCGCCTCG CCAAGGCATT CGTCGGCATG
TCGAAGGACG ATGCCCTGGT GCTCTGGCTG CGCCCGGCCG ATCTCGCCGC CCTGGGCAAG
ACCGTGCCCA CGCAGACCGT GTTCATGTCG GGGCTCATGG GCGGCCTCGA GCGCGCGCCG
TTGCCGGCGC TCTGGCGTGA CGTGACGCGC ATTGCCTATC CGTTCGACCT GCCGGAGCGC
CGGCGTGTGC GCGTCGACTA CGCGCTCGGG TGGTTCGCCA TCCGGCATAT CCCGGTGGTC
GATGAACAGG TGCAGGCCGA CACCTTCCTG GCCTGCGGGC TGCTCGCCGA GACCCTGAGC
CATATGGCCG ATACGTTCGT GCGCGACTAC CTCGTGGAGC GCATCGAGGA CATGCTCGAG
CGCCGCGTGA TCACCGGCTA CTACCCGCGC CTGACCCTCG CGCCGGGGCA GCGTTTCGCG
TCGAAGGGCG GCTACCTGGT GCACTTTGCC GACGCCGGCG GAACCCGGAT CGTGGCGGAC
GGCGACTGGA TCGTGCCTTA G
 
Protein sequence
MCLAMPAGQA GSASAADPGE AIFREGVLPS GAPLVATRDG GMRMEGAAGA CVNCHRRSGL 
GARSGLSSIP PITGRYLFHP PAKSGEDRGI PYVETMRGDR EPYTDATLAR AIRDGIDSQG
RPMRYLMPHF TLGDGDMAAL IAYLKRLDPR RAPGVGSGVL HFATIITPDA DPVKRRGMLD
VLEHYVAEKN AFPLGATPPL RASRKMMYMV NRQWQLHVWE LSGPPQTWEA QLEQHLAAEP
VFAVVSGLGG KNWAPVSAFC ERAAVPCLFP NVEAPDIGHG DFYALYFSRG VRLEAGLLAA
GVADAMRGGA LKAVHQVYRS GDTGEAGAQA LAQALRSQGI DVSSHALAPG ERLAKAFVGM
SKDDALVLWL RPADLAALGK TVPTQTVFMS GLMGGLERAP LPALWRDVTR IAYPFDLPER
RRVRVDYALG WFAIRHIPVV DEQVQADTFL ACGLLAETLS HMADTFVRDY LVERIEDMLE
RRVITGYYPR LTLAPGQRFA SKGGYLVHFA DAGGTRIVAD GDWIVP