Gene RSc2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2272 
Symbol 
ID1221117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2462771 
End bp2463760 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content71% 
IMG OID637238671 
Producthypothetical protein 
Protein accessionNP_520393 
Protein GI17546991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.752839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.191333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC TCACGCTCAG CGGCGTTGCG GCGCAGATCG CGGCGGTGGC CATGGCCTTG 
CATGCGGGCA ACAGCCTGCC GCTGCTGCTG TCCTGCATGA TGACGCAGGG CATGGCCGCC
CTGCTGATCG GCCTGGCCGC CTGGCGCCTG CTGCCGCGCC GCTACCGCGT GCCGTTCGTC
TGGAGCTACG GCTACCTGGT GACGCTGTGC TTCGTCATCC CGGTGGCGGG CTGCCTGCTG
GTGCTCGGCA GCGCGCTGAT CGGCAAGATG TTCCCCGAGC CGAAGCAGAA GAGCGCGCTT
GCCGAGGTCG GCCTGCCGGT CTTCGTGGCC CACCTGATCT CGCGCGTGAC GCACGGCGGC
GGCGCCCGGC TGCGGGCGCA GCTCGGCAAC ACGCGCGCGC CGGTGCAGAG CCGCATGACG
GCGCTGGTCG CCATGCAGAC CATGCCGACC CGCACCGCCA GTCCGGTGCT GCGCGACCTG
CTGGCCGATC CGGTGGACGA CATCCGCCTG CTGGCCTACG GCATGCTCGA CAGCGCCGAG
AAGGTGCTGA TGCAGAAGAT CCTGGCCGAG CTGCCGCGGC TGGAGGAGGC GGCCACCACG
CCGGAGGCCC GCTACGAGAT CAACAAGCGC CTGGCCGACC TGTACTGGGA GCTGATCTAC
CAGAACCTGG TGCAGGGCGA TGTCTACCGC TATACCGCCG AGCAGGTCGA GCGCTATGCC
AGCGCCGCGC TGGACATCCT GCCCGGCAAC GCCGCGCTGT GGTACATGCG CGGCCGGCTG
GCGCTGTCGC GCCGCGAGGC CGACGTGGCT GAGTCGCACC TGCGCCGGGC CGAGGCCCTG
GGCTTCCCGC GCGACCGCCT GCTGCCGCCG CTGGCCGAGG CCTGCTACCT GCGCCGCGAC
TATGCCGGCG CGCGGGCCGC GCTGGCGCAG TTCTCCAGCC GCTCGCCGCT ACCGCTGCTG
CGCCCGCTGT TGCGCTACTG GACATCATGA
 
Protein sequence
MFKLTLSGVA AQIAAVAMAL HAGNSLPLLL SCMMTQGMAA LLIGLAAWRL LPRRYRVPFV 
WSYGYLVTLC FVIPVAGCLL VLGSALIGKM FPEPKQKSAL AEVGLPVFVA HLISRVTHGG
GARLRAQLGN TRAPVQSRMT ALVAMQTMPT RTASPVLRDL LADPVDDIRL LAYGMLDSAE
KVLMQKILAE LPRLEEAATT PEARYEINKR LADLYWELIY QNLVQGDVYR YTAEQVERYA
SAALDILPGN AALWYMRGRL ALSRREADVA ESHLRRAEAL GFPRDRLLPP LAEACYLRRD
YAGARAALAQ FSSRSPLPLL RPLLRYWTS