Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2268 |
Symbol | TISRso_a |
ID | 1221113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2458959 |
End bp | 2459252 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238667 |
Product | ISRSO8-transposase orfA protein |
Protein accession | NP_520389 |
Protein GI | 17546987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.269801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGG TACCGAAACA GTCATACACG GCGGAGTTCA AGGCGGCAGC CGTACAACGA GTCAAAGACG GGCAAGGCGT GGGTGCGGTG GCCCGCGAGT TGAGCGTCTC GGAGCAGACG CTGCGCAACT GGATGAAGGC CGAGCAGGCT GGCAAGCTGG GCGGCGCCGG CGCGAAGGTC GTCACGCCGG AGCAGATGGA GCTCTCGCGC CTGCGCGCCG AGAACAAGCG GCTGCAAATG GAACTCGAAA TCGCAAAAAA GGCGGCGGCG TACTTCGCGA AAGACCTGCT GTGA
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Protein sequence | MFKVPKQSYT AEFKAAAVQR VKDGQGVGAV ARELSVSEQT LRNWMKAEQA GKLGGAGAKV VTPEQMELSR LRAENKRLQM ELEIAKKAAA YFAKDLL
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