| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2266 |
|---|
| Symbol | tISRso11a |
|---|
| ID | 1221111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2457507 |
|---|
| End bp | 2457935 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637238665 |
|---|
| Product | ISRSO11-transposase orfA protein |
|---|
| Protein accession | NP_520387 |
|---|
| Protein GI | 17546985 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.63174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.288559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGC GCTGGATCAA CGCGTGGCAG CGCCATGGGA AATCCGGACT ACGCAAGAAG
CATGAAGCGT ATAGCGCCGA GTTCAAGCTG ACGGTGCTGC AGCGCATGTG GCGCGACGAG
TTGTCCTATC AGCAAGTCAG CGCTGTGTTC GATTTGCGTG AGGCTGGCGG CGTCAGCCGC
TGGGACCGCC AGTATCATGA GGGCGGTTTC GACGCCCTAC AGCCGCGCCG CAAAGGCGGG
GCACCCATCA TGTCCCAGTC CAAGCAAGAT CCCCAACCCG CTGCGCAGCC GGCTCAAGAC
GAGCGCTCGC GCGAGGATTT GCTCAAAGAG AACGAGTGTT TGCGCGCGGA GGTGGCGTAC
CTAAAAAAGT TAGATGCCCT GCTGCGTGCC AAACAGCAGC AGGCACCAAA GAAAAAGCGC
AAGTCGTGA
|
|---|
| Protein sequence | MIRRWINAWQ RHGKSGLRKK HEAYSAEFKL TVLQRMWRDE LSYQQVSAVF DLREAGGVSR
WDRQYHEGGF DALQPRRKGG APIMSQSKQD PQPAAQPAQD ERSREDLLKE NECLRAEVAY
LKKLDALLRA KQQQAPKKKR KS
|
|---|
| |