Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2263 |
Symbol | |
ID | 1221108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2455243 |
End bp | 2456418 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238662 |
Product | lipoprotein |
Protein accession | NP_520384 |
Protein GI | 17546982 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.766441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.339278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC GCTATCAGAA GACCCTCATC GCGCTGCCAC TGCCGTTCAT CATCGCCGCG TGCGGTGGCG GTGGTGGCGC AGACACCGCC GGCATGGGCG CGCTTCATGT CGCGATGACG GATGCACCGG CCTGCGGCTT CGATCACGTC TACGTAACCG TGGACAAGGT GCGCGTGCAC GCCAGCGCGT CCGCCGCCGA CACCGACAGC GGCTGGACCG ACATTGCGCT GGCCACCCCG CAGAAAGTCG ACCTGCTCGC GCTCACCAAC GGCGTGCTGA CCGACCTGGG CCGCGCGCCG CTGCCAGCCG GGCAATACCA GCAGGTGCGC CTGGTGCTGT CAGCCAACCA GGGCAACGTC CTCGCCAATT CGGTCGTGGT GACCGGCTCG GCCACAGAGC AGGCGCTGGC CACGCCCAGC GGCACGCAGA GCGGTTACAA GATCATCCAG CCCTTCACGG TGCAGGCCGG CACGCTGGTC GATCTGGTGC TGGACATCAA TGCCTGCAAA TCGATCGTGC AGCAAGGCAA CGGCGCCTAT AGCCTCAAGC CGGTGGTGAC CGCCACGCCG GTGGTCGTCA GCGGCGCGAT CTCGGGCTAC GTGAGCGCCG CGCAGGCCGG CGCCACGGTC TATGCCGAAC AGAACGGCGC GGTCGTTCGC GGCACGATGG CTGACGCCAT GGGGCAGTTC GTGCTCTCGC CGCTGGTGCA GAGCAGCACC AACGGCACGT ACGACGTGGT CGTGGTCGAC AACACGCTGC CGACCGGCCA TGCCACGGGC ATCATCCGCG CCGTGCCGGT CACGGCCAGC GCCACGACGA CGGTAGCCAC CGCCGCCACG CCGATCACCT TGCCCACCTC CACCAGCAAT ACGGCGTCGG GCACGGTCAC CGCCTCGGCG CAGGCCTCGC TGCGGGCGCT GCAGACCATC AGCTCGGTGT CGTACGAGAT CGCCTCGGCG AATGCCAACC TCGATACCGG AGCGTATTCG CTGACGCTGC CGGCCGCGGC ACCGCTGGTG GGCACGTACA GCGCGACGCT GCCGATCGCG CTGTCGGTGG TATCGTCCGT GGCCGGGCAG TACTCGATGC AGGCGACCAG CGCGTCTGGC GTCACGCAAA GCCGTGCGGT GAATGTCTCG GCGGGCAGCC AGACCGGCGT CAACTTCAGT TTCTAA
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Protein sequence | MKTRYQKTLI ALPLPFIIAA CGGGGGADTA GMGALHVAMT DAPACGFDHV YVTVDKVRVH ASASAADTDS GWTDIALATP QKVDLLALTN GVLTDLGRAP LPAGQYQQVR LVLSANQGNV LANSVVVTGS ATEQALATPS GTQSGYKIIQ PFTVQAGTLV DLVLDINACK SIVQQGNGAY SLKPVVTATP VVVSGAISGY VSAAQAGATV YAEQNGAVVR GTMADAMGQF VLSPLVQSST NGTYDVVVVD NTLPTGHATG IIRAVPVTAS ATTTVATAAT PITLPTSTSN TASGTVTASA QASLRALQTI SSVSYEIASA NANLDTGAYS LTLPAAAPLV GTYSATLPIA LSVVSSVAGQ YSMQATSASG VTQSRAVNVS AGSQTGVNFS F
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