Gene RSc2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2263 
Symbol 
ID1221108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2455243 
End bp2456418 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID637238662 
Productlipoprotein 
Protein accessionNP_520384 
Protein GI17546982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.766441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.339278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC GCTATCAGAA GACCCTCATC GCGCTGCCAC TGCCGTTCAT CATCGCCGCG 
TGCGGTGGCG GTGGTGGCGC AGACACCGCC GGCATGGGCG CGCTTCATGT CGCGATGACG
GATGCACCGG CCTGCGGCTT CGATCACGTC TACGTAACCG TGGACAAGGT GCGCGTGCAC
GCCAGCGCGT CCGCCGCCGA CACCGACAGC GGCTGGACCG ACATTGCGCT GGCCACCCCG
CAGAAAGTCG ACCTGCTCGC GCTCACCAAC GGCGTGCTGA CCGACCTGGG CCGCGCGCCG
CTGCCAGCCG GGCAATACCA GCAGGTGCGC CTGGTGCTGT CAGCCAACCA GGGCAACGTC
CTCGCCAATT CGGTCGTGGT GACCGGCTCG GCCACAGAGC AGGCGCTGGC CACGCCCAGC
GGCACGCAGA GCGGTTACAA GATCATCCAG CCCTTCACGG TGCAGGCCGG CACGCTGGTC
GATCTGGTGC TGGACATCAA TGCCTGCAAA TCGATCGTGC AGCAAGGCAA CGGCGCCTAT
AGCCTCAAGC CGGTGGTGAC CGCCACGCCG GTGGTCGTCA GCGGCGCGAT CTCGGGCTAC
GTGAGCGCCG CGCAGGCCGG CGCCACGGTC TATGCCGAAC AGAACGGCGC GGTCGTTCGC
GGCACGATGG CTGACGCCAT GGGGCAGTTC GTGCTCTCGC CGCTGGTGCA GAGCAGCACC
AACGGCACGT ACGACGTGGT CGTGGTCGAC AACACGCTGC CGACCGGCCA TGCCACGGGC
ATCATCCGCG CCGTGCCGGT CACGGCCAGC GCCACGACGA CGGTAGCCAC CGCCGCCACG
CCGATCACCT TGCCCACCTC CACCAGCAAT ACGGCGTCGG GCACGGTCAC CGCCTCGGCG
CAGGCCTCGC TGCGGGCGCT GCAGACCATC AGCTCGGTGT CGTACGAGAT CGCCTCGGCG
AATGCCAACC TCGATACCGG AGCGTATTCG CTGACGCTGC CGGCCGCGGC ACCGCTGGTG
GGCACGTACA GCGCGACGCT GCCGATCGCG CTGTCGGTGG TATCGTCCGT GGCCGGGCAG
TACTCGATGC AGGCGACCAG CGCGTCTGGC GTCACGCAAA GCCGTGCGGT GAATGTCTCG
GCGGGCAGCC AGACCGGCGT CAACTTCAGT TTCTAA
 
Protein sequence
MKTRYQKTLI ALPLPFIIAA CGGGGGADTA GMGALHVAMT DAPACGFDHV YVTVDKVRVH 
ASASAADTDS GWTDIALATP QKVDLLALTN GVLTDLGRAP LPAGQYQQVR LVLSANQGNV
LANSVVVTGS ATEQALATPS GTQSGYKIIQ PFTVQAGTLV DLVLDINACK SIVQQGNGAY
SLKPVVTATP VVVSGAISGY VSAAQAGATV YAEQNGAVVR GTMADAMGQF VLSPLVQSST
NGTYDVVVVD NTLPTGHATG IIRAVPVTAS ATTTVATAAT PITLPTSTSN TASGTVTASA
QASLRALQTI SSVSYEIASA NANLDTGAYS LTLPAAAPLV GTYSATLPIA LSVVSSVAGQ
YSMQATSASG VTQSRAVNVS AGSQTGVNFS F