| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2253 |
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| Symbol | pcaJ |
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| ID | 1221098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2445855 |
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| End bp | 2446517 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238652 |
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| Product | 3-oxoadipate CoA-transferase subunit B protein |
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| Protein accession | NP_520374 |
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| Protein GI | 17546972 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0867253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCG AAGCCACCGC CAAGATCCAG CGCTGGACGC GCGACCAGAT CGCCGCCCGC
GTGGCGCGCG ACATCCCCGA CGGCTCGGTC GTCAACCTCG GTATCGGCCT GCCGACGCTG
GTGGCCAACC AGCTGCCGGC CGACCGCGAG ATCCTGCTGC ACAGCGAGAA CGGCCTGCTC
GGCATGGGCC CGGCGCCCGC GCCCGGCGCG GAAGACCCCG ACCTCATCAA CGCCGGCAAG
CAGCCGGTGA CCATCAAGCC GGGCGGGGCT TACTTCCACC ACGCCGATTC GTTTGCCATG
ATGCGGGGTG GCCATCTCGA CTACTGCGTG CTCGGCGCCT TCCAGGTGTC GGCCGCCGGC
GACCTGGCCA ACTGGCACAC CGGCGCGCCG GACGCGATTC CCGCCGTGGG CGGGGCGATG
GACCTGGCCA TCGGCGCCAA GCAGGTCTTC GTGATGATGG AGCACCAGAC CAAGCAGGGC
GACAGCAAGA TCGTGCCCGC GTGCACCTAC CCGCTGACAG GCATCGGCTG CGTGGATACC
ATCTACACCG ATCTCGCCGT GATCGACGTC ACGCCCGGCG GGCTGATCGT GCGCGAGATG
GCGGATGGCC TCGATTTCGA GACGCTGCAG ACGCTGACGG CCGTGCCGCT GCGTCGCGCT
TGA
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| Protein sequence | MNAEATAKIQ RWTRDQIAAR VARDIPDGSV VNLGIGLPTL VANQLPADRE ILLHSENGLL
GMGPAPAPGA EDPDLINAGK QPVTIKPGGA YFHHADSFAM MRGGHLDYCV LGAFQVSAAG
DLANWHTGAP DAIPAVGGAM DLAIGAKQVF VMMEHQTKQG DSKIVPACTY PLTGIGCVDT
IYTDLAVIDV TPGGLIVREM ADGLDFETLQ TLTAVPLRRA
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