Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2232 |
Symbol | |
ID | 1221077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2422411 |
End bp | 2422830 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238631 |
Product | putative transmembrane protein |
Protein accession | NP_520353 |
Protein GI | 17546951 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTCGC TGTTTTCCCC GGCGGTCTGC GCTGTCCCGC GCGTGCGCCT GATGCGCCAT GCGGGCGCGC TGGCCGCCCT CGCCGCCTGC CTTTTCGTCC TGCCCGCGCA GGCCGAAGTG ACGCCGGATA GCGCCGGCCT CGACCTGCCC GACGTGAAGG CCATCAACAA CCAGCCGATC GCCAAGCCGA CGCGCGGCGC GATTCACCAT GAGACCGTCA AGCCGAGCTT CGAGTATCGC GACAACGACG GCACCCAGAT CGAGGAGTAC CGCGTCAAGG GACAGGCCCC CGACATCCAT GTCAAATCCG GCATGGGGAC GTCGTACCAG ATGAGCAAGC CCGAAGACAG CTCGCCGCGC ATCCGCGAGC GCGACGGCGA CAACAGCCGC CTGCCCTCGG TCAACATCCT GAAGTTCTGA
|
Protein sequence | MDSLFSPAVC AVPRVRLMRH AGALAALAAC LFVLPAQAEV TPDSAGLDLP DVKAINNQPI AKPTRGAIHH ETVKPSFEYR DNDGTQIEEY RVKGQAPDIH VKSGMGTSYQ MSKPEDSSPR IRERDGDNSR LPSVNILKF
|
| |