| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2224 |
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| Symbol | |
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| ID | 1221069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2411998 |
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| End bp | 2413095 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238623 |
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| Product | dioxygenase alpha subunit |
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| Protein accession | NP_520345 |
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| Protein GI | 17546943 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATC TCAGCACCGC GCTGAATCTG GTGCCGTCTG AAACCCAGCT GCCCGTCTCC
GCATACTTCG ACGAGGCGCT GTACCAAACC GAAATCGAAC GTCTGTTCAA GCATGGCCCG
AGCTACGTCG GCCATGAGCT GATGGTGCCC GAGGTGGGCG ACTATCACAC GCTTGCCGCC
GAGGCCGAAG GCCGCGTGCT GGTACGCAAT CCGAACGGCG TCGAACTGCT ATCCAACGTA
TGCCGGCATC GCCAGGCGAT CATGCTCAAT GGGCGGGGCA ATGCCCAGAA CATCGTCTGC
CCGCTGCACC GCTGGACATA CGACCTGAAG GGCGAACTGC TGGGCGCGCC GCATTTCGAG
CGGCAGCCGT GCGTGCACCT GTCGCGCTCG CTGCTGCAGA ACTGGAACGG CCTGCTGTTC
GAGGGCAAGC GCGACGTGCG CAACGACCTC GCCCGCCTGG GCGTGGCGCG CGACCTCGAC
TTCTCCGGCT ACATGCTCGA CCACGTCGAG GTGCACGACT GCGACTACAA CTGGAAGACC
TTCATCGAGG TCTACCTGGA GGACTACCAC GTCGTGCCCT TCCACCCCGG CCTCGGCCAG
TTCGTCTCGT GCGACGACCT GACCTGGGAA TTCGGCGAGT GGTACAGCGT GCAGACGGTC
GGCATCCACG CCGGCCTGCG CAAGCCCGGC ACGGCGACCT ACCAGAAGTG GCATGACGCC
GTGCTGCGCT TCAACAACGG CGAGATGCCC AAGTACGGCG CGGTATGGCT GACGTACTAC
CCGAACGTGA TGGTGGAGTG GTACCCGAAC GTCCTGGTGG TCTCGACCCT GCATCCGATG
GGCCCGGGCA AGACCCGCAA CGTGGTCGAG TTCTATTACC CGGAAGAAAT CGTGCTGTTC
GAGCGCGAAT TCGTCGAGGC CGAGCGCGCC GCCTACATGG AGACCTGCAT CGAGGACGAC
GAGATCGCCG AGCGCATGGA TGCCGGCCGG CTGGCCCTGC TCAGGCGCGG CACCAGCGAG
GTCGGGCCTT ACCAGTCGCC GATGGAAGAC GGCATGCAGC ATTTCCACGA GTGGTACCGC
CGCGTGATGG ACTATTGA
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| Protein sequence | MSNLSTALNL VPSETQLPVS AYFDEALYQT EIERLFKHGP SYVGHELMVP EVGDYHTLAA
EAEGRVLVRN PNGVELLSNV CRHRQAIMLN GRGNAQNIVC PLHRWTYDLK GELLGAPHFE
RQPCVHLSRS LLQNWNGLLF EGKRDVRNDL ARLGVARDLD FSGYMLDHVE VHDCDYNWKT
FIEVYLEDYH VVPFHPGLGQ FVSCDDLTWE FGEWYSVQTV GIHAGLRKPG TATYQKWHDA
VLRFNNGEMP KYGAVWLTYY PNVMVEWYPN VLVVSTLHPM GPGKTRNVVE FYYPEEIVLF
EREFVEAERA AYMETCIEDD EIAERMDAGR LALLRRGTSE VGPYQSPMED GMQHFHEWYR
RVMDY
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