| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2165 |
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| Symbol | pcp1 |
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| ID | 1221009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2348446 |
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| End bp | 2349093 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238563 |
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| Product | pyrrolidone-carboxylate peptidase |
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| Protein accession | NP_520286 |
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| Protein GI | 17546884 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.206195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACCG TCCTCGTCAC CGGTTTCGAT CCGTTCGAAA ACGAGCCCGT CAACCCATCG
TGGGAAGCCG TGCGCACGCT CGACGGCCAG GGCATCGCCG GCGCCGACAT CGTCACGCGC
CAGTTGCCGA CGGTGTTCGG CGAATCGATC CGGGTGCTCG ACAGGCTGCT GATGAGCCTG
CGCCCGGACG TGGTGATCGC CGTGGGCCAG GCCGGCGGGC GCGCCGAGAT GGCCATCGAG
CGCGTCGCCA TCAACGTGGA CGATGCGCGC ATCGCCGACA ACGCCGGCCG GCAGCCGATC
GATACCGCCA TTGTCGCGGG CGGGCCGGCG GCGTACTTCT CGACGCTGCC GATCAAGGCC
ATCGTGCACG AACTGCGCGC CGCCGGCGTG CCCGCCTCGG TGTCGCAGAC GGCGGGGACG
TTCGTCTGCA ACCATGTCTT CTATGGGCTG ATGCACGCGA TTGCCCACCA CGGGCTGCAC
GCGCGCGGCG GCTTCATCCA TATTCCCTAT CTGCCGGCGC AGGCGGCCGG GCATCCCGGG
CAGCCGAGCA TGGCGCACGA CACCGTCGTC GCCGGACTGC GCATTGCGAT CGAGACAACG
CTGCGCAGGC AGGAAGACAT CCGGGAAGCG GGCGGTCAGT TGCACTGA
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| Protein sequence | MPTVLVTGFD PFENEPVNPS WEAVRTLDGQ GIAGADIVTR QLPTVFGESI RVLDRLLMSL
RPDVVIAVGQ AGGRAEMAIE RVAINVDDAR IADNAGRQPI DTAIVAGGPA AYFSTLPIKA
IVHELRAAGV PASVSQTAGT FVCNHVFYGL MHAIAHHGLH ARGGFIHIPY LPAQAAGHPG
QPSMAHDTVV AGLRIAIETT LRRQEDIREA GGQLH
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