Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2093 |
Symbol | |
ID | 1220934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2265322 |
End bp | 2266164 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238488 |
Product | signal peptide protein |
Protein accession | NP_520214 |
Protein GI | 17546812 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2998] ABC-type tungstate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.351868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC TGTCCGTCAT CCTCCGGTTT CCCGCGCGCT TCTGCCTGGC ATTGGCCATC GTCGGCGCCG GTGCCGCATA TGCAGGCGAG CTCCGCATGG CCACGACCAC CAGCACGGAA AACTCCGGCC TGCTCAAGGT GCTGCTGCCC AAGTTCGAGG CCGCCACCGG GGTGCACGTG CAGGTGATCG CCGTGGGCAC CGGCAAGGCG GTCAAGCTGG GCGAAGCCGG CGATGTCGAC GTGGTGCTGG TGCACGCCCG GCAGCTGGAG GACGCCTTCG TCGCGTCCGG CGGCGGCATC GACCGGCGCG ACGTGATGTA CAACGACTTC ATCCTGGTCG GCCCGAGCGC CGATCCGGCC CACGTGCGCG CGAGCAGCAA TGTCATCCAG GGCATGGAGG CCATCGCCGC CGCCGGCGCG AAGTTCGTCT CGCGCGGCGA CCATTCCGGC ACCGATGTCA TGGAGCAGCA TTACTGGAAG ACCGCCGGCA TCGACCCCAA GGGTAAGCCC TGGTACGTGA GCGCGGGCCT GGGCATGGGC GAAGTCCTGA ACATGGCTGC GCAGATAAAC GCCTATACGC TGTCGGACCG CGCCACCTAC GGCGCCTACC GCGCCCGCAC CGGGCTCGAC ATCGTGCTGG CCGGCGACCC GCGCATGTTC AACCCCTACG GCATCATCGC CGTCAATCCG GCCAGGCACC CCGGCATCAA CTACACCGAC GCGACCCGGC TGATCGAGTG GATCACCTCG AGCGCCGGTC AGCGGGCGAT CGCCGAGTTC AAGGTGAACG GGGAGCAGGT GTTCTTTCCG AACTACGGGA AGGCGGTTGC CGGCGGCAAG TAG
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Protein sequence | MSKLSVILRF PARFCLALAI VGAGAAYAGE LRMATTTSTE NSGLLKVLLP KFEAATGVHV QVIAVGTGKA VKLGEAGDVD VVLVHARQLE DAFVASGGGI DRRDVMYNDF ILVGPSADPA HVRASSNVIQ GMEAIAAAGA KFVSRGDHSG TDVMEQHYWK TAGIDPKGKP WYVSAGLGMG EVLNMAAQIN AYTLSDRATY GAYRARTGLD IVLAGDPRMF NPYGIIAVNP ARHPGINYTD ATRLIEWITS SAGQRAIAEF KVNGEQVFFP NYGKAVAGGK
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