Gene RSc2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2084 
Symbol 
ID1220925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2256711 
End bp2257781 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content70% 
IMG OID637238479 
Producthypothetical protein 
Protein accessionNP_520205 
Protein GI17546803 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAG GAGCACCCGT GAAAGTCATG ATCGTCACCG ATGCCTGGGA ACCGCAGGTC 
AACGGCGTCG TCCGCACCCT CACGTCGACG CGTCGCGAAC TCGAAGCCAT GGGGCACATC
GTCGACATGA TCACGCCGCT CGAATTCACG ACGGTGCCGT GCCCGACGTA TCCGGAAATC
CGGCTGTCGA TCCTGCCGGC CAAGCGGGTG CGCCGGCGCA TCGAGGCGTT CGCGCCGCAG
GCGCTGCATA TCGCCACGGA GGGGCCGCTC GGCCTGGCCG CGCGTGCGTA TGCGCTGCGC
CACAAGCTGC CCTTCACGAC GGCGTACCAC ACGCGCTTTC CGGAGTACGT GCAGGCGCGC
TTCGCCATTC CGCTGGCATG GACGTACCGC TTCCTGCACT GGTTCCACAG CCCCGCACAG
GCGGTGATGG CGCCCACGCC CGTGGTGCTG CGCGACCTGG AGGCCTACGG CATCACCAAC
GGCGTGCTGT GGACGCGCGG CGTGGACCTG GACGTCTTCA CCATGCAGCG CCCGAACGCG
CTCAACACGG CACACCCGAT CTTCCTCTAC GTGGGACGCG TGGCCGTGGA GAAGAACGTC
GAGGCCTTCC TCGAGCTGGA CCTGCCCGGC TCCAAGTGGG TGGTGGGCGA AGGCCCGGCG
CTGGCCGGCC TGAAGGCCAA GTACCCGAAC GCCAACTACC TGGGCGTGCT CAGGCAGCCG
GAACTGGCCA AGGTGTATGC CTCGGCCGAT GTGTTCGTCT TCCCGAGCCG CACCGACACC
TTCGGCCTGG TGCTGCTCGA AGCGCTGGCC AGCGGCCTGC CCGTCGCGGC GTATCCGGTG
ACCGGACCGA TCGACGTGCT GGGCGACGCG CCGGCCGGCG TGATGCGCGA AGACCTGCGC
GAGGCCTGCC TGGAGGCGCT GCGCATCGAC CGCGCCACGG CGCGCGCGCA TGCCGAGCGC
TTCTCGTGGC GCGCGGCGTC CGAGCAGTTC CTGGCCCACC TGCGCCCGCT GCCCGCGGCG
CAGGCGGCCG ACACCCAGGC CCCGCAGCCT TCCACCGCCA CGGGAGCCTG A
 
Protein sequence
MPQGAPVKVM IVTDAWEPQV NGVVRTLTST RRELEAMGHI VDMITPLEFT TVPCPTYPEI 
RLSILPAKRV RRRIEAFAPQ ALHIATEGPL GLAARAYALR HKLPFTTAYH TRFPEYVQAR
FAIPLAWTYR FLHWFHSPAQ AVMAPTPVVL RDLEAYGITN GVLWTRGVDL DVFTMQRPNA
LNTAHPIFLY VGRVAVEKNV EAFLELDLPG SKWVVGEGPA LAGLKAKYPN ANYLGVLRQP
ELAKVYASAD VFVFPSRTDT FGLVLLEALA SGLPVAAYPV TGPIDVLGDA PAGVMREDLR
EACLEALRID RATARAHAER FSWRAASEQF LAHLRPLPAA QAADTQAPQP STATGA