| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2078 |
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| Symbol | |
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| ID | 1220919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2251927 |
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| End bp | 2252493 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238473 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | NP_520199 |
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| Protein GI | 17546797 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCTG AACAGGAACT GTCGGCCTTC CTCCTAAGCG TCGAAAAACG CGCCTTCAAG
CAGGCGGTGT TCGCGGTCCG CGACGACGAT GCCGCCCTCG ACATCGTCCA GGATGCGATG
ATCAAGCTGG CCGAGAAGTA CGGCGACAAG CCCGAGGCCG AGCTGCCGCT GCTGTTCCAG
CGCATCCTGC AGAACACGAT CCACGACTGG TTCCGGCGCA CCAAGGTGCG CAACACCTGG
GTCAGCCTGT TCTCCAGCTT CCGCACGGAC ACCGACGGCG ACGACACCGA CCCGCTCGAA
CTGATCGAAA GCGAAGCCGG CTCCACTGCG GCGGAAAGCA GCGCCGACAA GGTCGAGCGC
GCCCAGGTGC TGCAGATCCT GGAGCGCGAA ATCGAGAAGC TGCCGGCACG TCAACGGGAG
GCCTTCTTGA TGCGTTACTG GGAAGACATG GATGTTGCCG AGACAGCCCA GGCCATGGGC
TGTTCCGAGG GCAGTGTGAA GACGCACTGC TCGCGGGCAA CGCACGCCCT CGCGCAAGCG
CTCCGGGCGC GAGGAATCCG ACTATGA
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| Protein sequence | MASEQELSAF LLSVEKRAFK QAVFAVRDDD AALDIVQDAM IKLAEKYGDK PEAELPLLFQ
RILQNTIHDW FRRTKVRNTW VSLFSSFRTD TDGDDTDPLE LIESEAGSTA AESSADKVER
AQVLQILERE IEKLPARQRE AFLMRYWEDM DVAETAQAMG CSEGSVKTHC SRATHALAQA
LRARGIRL
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