| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2047 |
|---|
| Symbol | |
|---|
| ID | 1220887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2220213 |
|---|
| End bp | 2220830 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637238441 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520168 |
|---|
| Protein GI | 17546766 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.440129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.12393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG ATCCTGCCCG CCTGTCCGCC GATTCCAATG AGGCCGTGTC CGATCCGGAT
GCCGGCCTGC GCGAAACGCA GCTGGCTTCG GCGCTGGTGC ACCAGGGCAA GTTCCTGACG
CTCAAGCAGG ATGTCGTCCG CCTGCCGGAT GGCCGCAACG CCAGCCGTGA ATACCTGATC
CATCCGGGCG CGGTGATGAT GATCCCGCTG TTCGACGATG GCACCGTGCT GATGGAGCGC
CAGTTCCGCT ATCCGGTGGG CAAGGTGATG ATCGAATTCC CGGCGGGCAA GCTCGATCCG
CGCGAGGGCG CGCTGGCCTG CGGCAAGCGC GAGCTGCGCG AGGAGACGGG CTACGTGGCG
CAGCGCTGGG ATTTCCTGAC GCGCATCCAC CCGGTCATCT CGTATTCCAC CGAGTTCATC
GATCTCTATC TCGCCCGCGA CCTGCAGCCG GGCGAAAGCG CGCTGGACGA GGGCGAGTTC
CTCGAGACCT TCATCGCGCC GGCCGGCCAG TTGATCGACT GGGTGCGCAC CGGCAGGATC
TCCGACGTCA AGACCATCAT CGGCGTATTC TGGCTGGAGA AAATCCTGTC GGGCACGTGG
ACGCCGGGCG ACGCCTGA
|
|---|
| Protein sequence | MKPDPARLSA DSNEAVSDPD AGLRETQLAS ALVHQGKFLT LKQDVVRLPD GRNASREYLI
HPGAVMMIPL FDDGTVLMER QFRYPVGKVM IEFPAGKLDP REGALACGKR ELREETGYVA
QRWDFLTRIH PVISYSTEFI DLYLARDLQP GESALDEGEF LETFIAPAGQ LIDWVRTGRI
SDVKTIIGVF WLEKILSGTW TPGDA
|
|---|
| |