Gene RSc2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2043 
Symbol 
ID1220883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2216600 
End bp2217070 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID637238437 
Producthypothetical protein 
Protein accessionNP_520164 
Protein GI17546762 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.770796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.273128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG CAGCGTTGCC GTACACGTTC TATTTCGACG ATTTCCAGGT CGGCCAGACG 
ATGGAGATGG GCACCTACGC GGTGACCGAG GACGAGATCC TGGCCTTCGC CCGGCAGTAC
GACCCGCAGC CGTTTCATGT CGACCCGGAG GCGGCCCGGC GCAGCATCTA CGGCGGCCTC
ATTTCCAGCG GCTGGATGAC CTGCGCGGTG ATGATGCGGC TGATGGTGCA GAACTTTCTC
AGCAAGTCGT CCAGCATGGG TTCGCCGGGC GTGGACGAGA TCCGTTGGCT CAGGCCGGTG
TATCCGGGTG ATACGCTGTC GGTGTCGAGC ACCTGCCTGG AGGTGCGGCC GTCGCAGTCC
AAGCCCGACC GCGGCGTGGC GATCAACCGC TGGGAAGCGC GCAACCAGCA CGGCGAGCTG
GTCTGCACCC TGGTCGGCAT GGGTCTGTTC GGCCGCCGCC CGGCCGCCTG A
 
Protein sequence
MTEAALPYTF YFDDFQVGQT MEMGTYAVTE DEILAFARQY DPQPFHVDPE AARRSIYGGL 
ISSGWMTCAV MMRLMVQNFL SKSSSMGSPG VDEIRWLRPV YPGDTLSVSS TCLEVRPSQS
KPDRGVAINR WEARNQHGEL VCTLVGMGLF GRRPAA