Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2043 |
Symbol | |
ID | 1220883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2216600 |
End bp | 2217070 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238437 |
Product | hypothetical protein |
Protein accession | NP_520164 |
Protein GI | 17546762 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.770796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.273128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAG CAGCGTTGCC GTACACGTTC TATTTCGACG ATTTCCAGGT CGGCCAGACG ATGGAGATGG GCACCTACGC GGTGACCGAG GACGAGATCC TGGCCTTCGC CCGGCAGTAC GACCCGCAGC CGTTTCATGT CGACCCGGAG GCGGCCCGGC GCAGCATCTA CGGCGGCCTC ATTTCCAGCG GCTGGATGAC CTGCGCGGTG ATGATGCGGC TGATGGTGCA GAACTTTCTC AGCAAGTCGT CCAGCATGGG TTCGCCGGGC GTGGACGAGA TCCGTTGGCT CAGGCCGGTG TATCCGGGTG ATACGCTGTC GGTGTCGAGC ACCTGCCTGG AGGTGCGGCC GTCGCAGTCC AAGCCCGACC GCGGCGTGGC GATCAACCGC TGGGAAGCGC GCAACCAGCA CGGCGAGCTG GTCTGCACCC TGGTCGGCAT GGGTCTGTTC GGCCGCCGCC CGGCCGCCTG A
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Protein sequence | MTEAALPYTF YFDDFQVGQT MEMGTYAVTE DEILAFARQY DPQPFHVDPE AARRSIYGGL ISSGWMTCAV MMRLMVQNFL SKSSSMGSPG VDEIRWLRPV YPGDTLSVSS TCLEVRPSQS KPDRGVAINR WEARNQHGEL VCTLVGMGLF GRRPAA
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