Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2042 |
Symbol | |
ID | 1220882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2216085 |
End bp | 2216573 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238436 |
Product | hypothetical protein |
Protein accession | NP_520163 |
Protein GI | 17546761 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.263317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTCA TCGAATCGCT CGACGCGCTG CGGGGATTGA TCGGCCAGGA GGTCGCGGTC AGCGACTGGG TGGAGATCAC GCAGCAGCAG GTCAACCAGT TTGCCGAGGC CACGGGAGAC CGCCAGTGGA TCCACGTGGA TGTGGAGCGC GCCCGGCGCG AGTCGCCGTT CGGCGCGCCG GTGGCGCACG GTTTCCTGAC GCTGTCGCTG CTGCCGGCGC TGATGCAGAG CGCGCTCGAC ATGCCCGATG TGAAGATGGG CGTGAACTAC GGCCTGAACA AGGTCCGCTT TCCGGCGCCG GTGCCGGTGG GCAGCCGTCT GCGCGCCCGC GTGAGCCTGC TGGAGATGGA GATGCTGCCG CCGCTGCAGC CGTCGCCGGA TGCGCCCGCG CTGACCGGCG CGCAGATGAC CTGGGGCGTG ACGATCGAGT GCGAAGGGCA GGCGCGGCCC GTGTGCGTGG CCGAGTCGAT TTCGCGCCGC TATTCCTGA
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Protein sequence | MRVIESLDAL RGLIGQEVAV SDWVEITQQQ VNQFAEATGD RQWIHVDVER ARRESPFGAP VAHGFLTLSL LPALMQSALD MPDVKMGVNY GLNKVRFPAP VPVGSRLRAR VSLLEMEMLP PLQPSPDAPA LTGAQMTWGV TIECEGQARP VCVAESISRR YS
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