| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1951 |
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| Symbol | |
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| ID | 1220791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2127208 |
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| End bp | 2129274 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238345 |
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| Product | solute:Na+ symporter permease transmembrane protein |
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| Protein accession | NP_520072 |
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| Protein GI | 17546670 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.788395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.806133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGCCG CCGCCGCTGC CACGGACAGC CGCTTTCGCA GGCGGCTGTT TGTCTATTAC
GGGCTGTACA CCGCCGGCCT GCTGCTCTTC ATCGTGATGA TGGGCGCGAT CGAGCGCGTG
CGCGGGCCGG GCGTGTGGCT CGGCTATGTG TTCCTGTTCG TCACCATCGC GATCTATGCC
TGCATCGGAC TGATCTGCCG CACGGCGGAC CTGACCGAGT ACTACGTGGC CGGGCGTCGC
GTGCCGGCTT TCTTCAACGG CATGGCCACC GCCGCCGACT GGATGAGCGC GGCCTCGTTC
ATCGGCCTGG CGGGCATCGT GTTCGCTTCC GGCTACGAGG GGCTGGCCTA CGTGATGGGC
TGGACCGGCG GCTACTGCCT GGTCGCGTTC CTGCTGGCGC CCTACCTGCG CAAGTTCGGC
GGCTACACGG TGCCGGACTT CCTCGCCACG CGCTACGGCA ACGGCGAGCG GGGCGGCAGC
GCGGTCGTGC GCGGCATCGC CGTGCTGGGC GCGACGCTGT GTTCGTTCGT CTACCTCGTC
GCGCAGATCC AGGGGGTGGG GCTGGTGGTC ACGCGCTTCA TCGGGGTGGA GTTCTCGGTG
GGGGTGTTCT TCGGGCTGGC GGGCATCCTG GTGTGTTCGT TCCTGGGCGG CATGCGCGCG
GTGACGTGGA CGCAGGTGGC GCAGTACATC ATCCTGATCG TGTCGTTCCT GGGCGTGGTG
GCGATGATCG GCTGGCACCG GCATCACGAC CCGGTGCCGC AGCTCTCCAC CGGCCGGCTG
CTGCTGCAGA TCGAGGCGGC GGAGCGCCGC ATCGCGCAGG ATCCCGCCGA GCAGGCCGTG
CGCGAGCGCT TCCTGGCCGA CGCGCAGGCG CTGCAGGAGC GCATCGCGCG GCTGCCGCAA
TCCTTCGACG AGACGCGTGA AGCGCTGAAC GCGCAGCTCA AGCGCGCGCG CGAACACAAC
GCGCCGCTGC GCGAGATCAA GGCGCTCGAG CGCGCGCGCG AGGCCTTCCC GCCCGATGCG
GCCGCCGCCG GCATCCTGTG GAACCAGCAG CGCGAGGAGG CGCTGGCGCA CAGCCGCGTG
GCGCCGCCCT CGACCGAGCC GTTCCCGTCC GCCTCCGAAG CCGAGCGCGG CCGGCAGCGG
CTGAATTTCG TGCTGCTGGT GTTCTGTCTG ATGGTCGGCA CGGCCAGCCT GCCGCACATC
CTGACGCGCT TCCATACCAC GCCGTCGGTG CGCGAGACGC GCAACTCGGT CGGCTGGACG
CTGTTCTTCA TCGTGCTGCT GTACGTGTCG GCGCCGGCGC TGGCGGCGCT GGTGAAGCTG
GACCTGCTGC AGCACCTGGT GGGCACCTCG TTCGCCGACC TGCCGCAGTG GATCGTGCCG
TGGCGCAAGG TGGACCCGCC GGTGTTCGCG CTGCACGACA TCAATGGCGA CGGCATCGTG
CAATGGGCCG AGGTGATGAT CCAGCCCGAC ATGATCGTGC TGGCCGCGCC CGAGATCGCC
GGGCTGCCGT ACGTGATGTC GGGGCTAATC GCGGCGGGCG CGCTGGCCGC CGCGCTGTCG
ACCGCCGATG GGCTGTTGCT GACCATTGCC AACGCGCTGT CGCACGATGT GTATTTCCAC
ATGATCGACA ACAACGCCAG CCACCAGCGC CGCGTGACCG GCGCCAAGGT GGTGCTGCTG
GGCGTGGCGC TGCTGGCGGC CTACGTGACC TCGCTCAAGC CGGGCAACAT CCTGTTCCTG
GTGGGCGCCG CGTTCTCGCT GGCGGCGTCG TGCTTCTTCC CGGTGCTGGT GCTGGGCGTG
TTCTGGAAGC GCACCAACCG GGCCGGCGCC ATCGCGGGCA TGCTGACCGG GCTGGCGGTC
AGCGTGTACT ACATCTTCGT CAACTACCCG TTCTTCACGC GGATGACGGG CATCCTGGGG
CGGCCGTGGT TCGGCGTCGA CCCGATCGCC TCGGGGGCGT TCGGCGTGCC GGCCGGGTTT
GCCGCCGCCG TGATCGTCAG CCTGCTGACC CGGCCGAACC GGCCGGTGGT GGACCGGCTG
GTCGGCTATC TGCGCGATCC GCTGTAG
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| Protein sequence | MAAAAAATDS RFRRRLFVYY GLYTAGLLLF IVMMGAIERV RGPGVWLGYV FLFVTIAIYA
CIGLICRTAD LTEYYVAGRR VPAFFNGMAT AADWMSAASF IGLAGIVFAS GYEGLAYVMG
WTGGYCLVAF LLAPYLRKFG GYTVPDFLAT RYGNGERGGS AVVRGIAVLG ATLCSFVYLV
AQIQGVGLVV TRFIGVEFSV GVFFGLAGIL VCSFLGGMRA VTWTQVAQYI ILIVSFLGVV
AMIGWHRHHD PVPQLSTGRL LLQIEAAERR IAQDPAEQAV RERFLADAQA LQERIARLPQ
SFDETREALN AQLKRAREHN APLREIKALE RAREAFPPDA AAAGILWNQQ REEALAHSRV
APPSTEPFPS ASEAERGRQR LNFVLLVFCL MVGTASLPHI LTRFHTTPSV RETRNSVGWT
LFFIVLLYVS APALAALVKL DLLQHLVGTS FADLPQWIVP WRKVDPPVFA LHDINGDGIV
QWAEVMIQPD MIVLAAPEIA GLPYVMSGLI AAGALAAALS TADGLLLTIA NALSHDVYFH
MIDNNASHQR RVTGAKVVLL GVALLAAYVT SLKPGNILFL VGAAFSLAAS CFFPVLVLGV
FWKRTNRAGA IAGMLTGLAV SVYYIFVNYP FFTRMTGILG RPWFGVDPIA SGAFGVPAGF
AAAVIVSLLT RPNRPVVDRL VGYLRDPL
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