| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1920 |
|---|
| Symbol | |
|---|
| ID | 1220760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2099826 |
|---|
| End bp | 2100578 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637238314 |
|---|
| Product | putative tail fiber assembly-like protein |
|---|
| Protein accession | NP_520041 |
|---|
| Protein GI | 17546639 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.40687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CCGTCTACCA CTACCACCCC ACCACCGGCG AATACGCGGG CAGCTCGCCG
GCGGACCACT CGCCGCTCGA ACCGGGCGTC GTGCTCATCC CGGCCCACGC CACCGACCAG
GCGCCGCCCG AGGCCGGCCC GCACGAGGTG GCCGTCTTCC GCGACGGCAG CTGGAGCGTC
GCGGCCGACT GGCGCGGCGT TGCCCTGTTC TCCAAGGCGG ATGGCTCTGC CGTCACCATC
GCCGAGATCG GCACGACACC GGCGGACGTG AGCGCCACCG AAACCGCACG GCCCAGCGCT
GCACACGTCT GGAAGGCCGG GCAGTGGATC GAGGACGCCC AGCTGAAGGC CTCGCAACTG
GTGGCGCTGA GGCAGCGCCT GTGCGACCAG CTCGACGCAG CGGCCGATGC GGTCCGCCTG
GCGGTAGTCG GAGATCCGTT GCGCGTGGTC GAATACCAGC GCGCCGCCGA CGAGGCGCAG
GCCTACCAGG CCGCCGGCTA CGCGGGCGAG GCCCCGCCAT CGGTGCAGAG TGCCGCCGAC
GCCAAGGGCT CGACCGCCCG GGCGGCCGCC GACGAAATCC TGGCGATGCA TGCCGCGTGG
AATGCTGCCC TGTACGGCAT TCGGTCGCTT CGCCTCGCGG GCAAAGAGCG CATCCGCAAC
GCGGCATCGG AGGAAGCCAC GCGCGCGGCC GCCGACCAGG CGCTTGCAGG CGTGCGCGGC
GTGTTGGCTG GCATGGGCGG GGGACAGGCA TGA
|
|---|
| Protein sequence | MTDTVYHYHP TTGEYAGSSP ADHSPLEPGV VLIPAHATDQ APPEAGPHEV AVFRDGSWSV
AADWRGVALF SKADGSAVTI AEIGTTPADV SATETARPSA AHVWKAGQWI EDAQLKASQL
VALRQRLCDQ LDAAADAVRL AVVGDPLRVV EYQRAADEAQ AYQAAGYAGE APPSVQSAAD
AKGSTARAAA DEILAMHAAW NAALYGIRSL RLAGKERIRN AASEEATRAA ADQALAGVRG
VLAGMGGGQA
|
|---|
| |