| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1883 |
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| Symbol | dppC2 |
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| ID | 1220722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2066937 |
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| End bp | 2067872 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238276 |
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| Product | peptide ABC transporter transmembrane protein |
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| Protein accession | NP_520004 |
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| Protein GI | 17546602 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.122955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.508741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACGT CCCCGCAGAC CGCCGCGCCC GCCCGGGCCG GCGCCGGCCC CGCGCCGCGC
AGGCAGTCGC CATGGCGGCG CGTGGCGGCG GATTTCGTGA CCTCGAAAAC CGCCGTGTTC
GGCCTCGCCG TCATCGTGCT GCTGGCAGCG GCGGCGCTGG CGGCGCCGTG GATCACGCCG
CAGAACCCCT ACGATCTGAT GCAGCTGGAC GTACTGGACG CGCGCCTGGC GCCGGGCTCG
CCCAACGGCG CGGGCACCTT CACGTACTGG CTCGGCACCG ACGGCCAGGG GCGCGATCTC
TATTCGGGCA TGCTCTACGG GCTGCGCATC AGCCTGGGCG TGGGGATCGG CTCGGCCGCC
GTGGCAGCGG TGATCGGCAC GCTGCTGGGG CTGATCGCGG CCTACGCGGG CGGCAAGGTC
GACAGCCTGA TCATGCGCAC GGTGGACCTG CTGCTGTCGT TCCCGTCGGT GCTGGTGGCG
ATGATGATCC TCGCCTACCT CGGCAAGAGC ATCGCCAACG TGGTGATGAC GCTGGTGCTG
CTGGAATGGG CGTACTACGC GCGCACCGTG CGCGGCCAGG CGCTGGTCGA GCGCCGCCGC
GAATACGTGG AGGCGGCGCG CTCGCTCGCC CTGCCCGGCT GGCGCATCGC GCTCCGGCAC
ATCCTGCCCA ACTGCCTGCC GCCGCTGATC GTGGTGGGCA CGCTGCAGGT GGCACGCGCG
ATCACGCTGG AGGCGACGCT GTCGTTCCTG GGCCTGGGCG TGCCGATCAC CGAGCCGTCG
CTGGGCCTGC TGATTGCCAA CGGCTACCAA TACATGCTGT CGGGCCAGTA CTGGATCAGC
GTCTATCCGG GCCTCGCGCT GCTGCTGGCG CTGGTCGCCA TCAACCTGGT GGGCGACCGC
CTGCGCGAGG TGCTCAACCC GAGGGCGTAC CGATGA
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| Protein sequence | MSTSPQTAAP ARAGAGPAPR RQSPWRRVAA DFVTSKTAVF GLAVIVLLAA AALAAPWITP
QNPYDLMQLD VLDARLAPGS PNGAGTFTYW LGTDGQGRDL YSGMLYGLRI SLGVGIGSAA
VAAVIGTLLG LIAAYAGGKV DSLIMRTVDL LLSFPSVLVA MMILAYLGKS IANVVMTLVL
LEWAYYARTV RGQALVERRR EYVEAARSLA LPGWRIALRH ILPNCLPPLI VVGTLQVARA
ITLEATLSFL GLGVPITEPS LGLLIANGYQ YMLSGQYWIS VYPGLALLLA LVAINLVGDR
LREVLNPRAY R
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