| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1881 |
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| Symbol | |
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| ID | 1220720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2064443 |
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| End bp | 2065957 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637238274 |
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| Product | putative transmembrane oxidoreductase protein |
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| Protein accession | NP_520002 |
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| Protein GI | 17546600 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0519373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGG GCCCGCAAGC ACACGGCCAC GCGCCGCAGA CCGCCGGACT GGCGGCGCTG
GAAGCCCGCC TGCGCCAGGA TCTCGCCTGG CTCGAACTGC CCGCCAAACC CTGGACACTG
CCGCACGCGC TGGACGGGCA GCCCGTGCTG GACGTCGCCA TCATCGGCGG GGGCATGGCG
GGCCTGGCCG CGGCGACGGC GCTCAAGCAT CTCGGCATCG GCGCGGTGGT GTTCGACCGC
GCGCCCGAAG GCTACGAAGG CCCGTGGGCG ACCACCGCCC GCATGGAAAC GCTGCGCTCG
CCCAAGCAGC TGACCGGCCC CGCGCTGGGC CTGCCCGCGC TGACGTTCCG GGCCTGGTTC
GAGGCGCAAT TCGGCGCCGA TGCATGGGAG ACGCTCGACA AGATCCCACG CCTGCAATGG
ATGGACTACC TGCGCTGGTA CCGCCGCGTG CTGCAGCTGG AGGTCCGCAA CGCGCATCAC
GTCAGGACCG TGCAGCCGCG CGCCGACGGT GCGGTCGAGC TGACCCTCGA CACACCGGAC
GCAGCCGGGC AGCGCGTGCT GGCGCGCCGC GTGGTGCTGG CCACCGGCCG TGACGGCCTG
GGCGGCCCGG CCGTGCCGGC GTTCGCGCAC CGCCTGCCGC ACCGCTGGTG GGCGCATTCG
TCCGATGCGA TGGACTACGG CGCGCTGGCG GGCAAACGGG TGGGCGTGAT CGGCGCGGGC
GCGTCGGCCA TGGATTCGGC CGCCACCGCG CTGGAAGCCG GCGCCGCGAG CGTCGATCTG
CTGATCCGCC GCCCCGACCT GCCCCGCATC AACAAGGGCA AGGGCGCGGG CAGCCCGGGG
CTGGTCCATG GCCACCAGCA TCTGCCGGAC GCCTGGAAAT GGCGCATCCG CCATTACATC
AATGCCGAGC AGGTGCCGCC GCCGCGCGGC AGCACGCTGC GCGTGTCGCG GCACCCGAAC
GCGCGCTTCA ACCTCGGCTG CCCCGTGCTG GGCGTGGACG AGCACAACGG TGCCCTGCAC
GTGACGACGC CCAAGGGCGT GTTTCGCCTC GACTTCCTGA TCTTTTCGAC GGGCTTTCGC
CTCGATTGGG CGGCGCGCCC CGAGTTCAGC GCGCTCGCGC CGCACGTGCG CCTCTGGCGC
GATCGCTACA CGCCCCGCCC CGGCGAGGAA GACGCGGAAC TGAGCGACTC GCCCGACCTC
GGCCCCGCCT TCGAATTGCG CGAGAAGACG CCCGGCCAGC TGCCGGGACT GTCGCGCGTG
CATTGCTTCT GCTACCCGGC GTCGCTCACG CACGGCAGCG TCTCGGGCGA CATCCCGGCC
ATCAGCGAAG GCGCGCGCCG GCTGGCGCAG GGCATCGCCG GGCTGCTGTA CCAGGAAGAC
ATCGAAGGCC ACTACGCCGC GATGCAGGCC TACGCCGAGC CGGAGATCTT CGGCGACGAG
TGGACGCCCG CGCCGCCGCC GCAGTCCGAG CCGGCCGCCG CGGCCGCCTC CCCTGCCCGC
GAGGCCGCGC GATGA
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| Protein sequence | MTAGPQAHGH APQTAGLAAL EARLRQDLAW LELPAKPWTL PHALDGQPVL DVAIIGGGMA
GLAAATALKH LGIGAVVFDR APEGYEGPWA TTARMETLRS PKQLTGPALG LPALTFRAWF
EAQFGADAWE TLDKIPRLQW MDYLRWYRRV LQLEVRNAHH VRTVQPRADG AVELTLDTPD
AAGQRVLARR VVLATGRDGL GGPAVPAFAH RLPHRWWAHS SDAMDYGALA GKRVGVIGAG
ASAMDSAATA LEAGAASVDL LIRRPDLPRI NKGKGAGSPG LVHGHQHLPD AWKWRIRHYI
NAEQVPPPRG STLRVSRHPN ARFNLGCPVL GVDEHNGALH VTTPKGVFRL DFLIFSTGFR
LDWAARPEFS ALAPHVRLWR DRYTPRPGEE DAELSDSPDL GPAFELREKT PGQLPGLSRV
HCFCYPASLT HGSVSGDIPA ISEGARRLAQ GIAGLLYQED IEGHYAAMQA YAEPEIFGDE
WTPAPPPQSE PAAAAASPAR EAAR
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