| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1880 |
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| Symbol | |
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| ID | 1220719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2063472 |
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| End bp | 2064446 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238273 |
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| Product | transcription regulator protein |
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| Protein accession | NP_520001 |
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| Protein GI | 17546599 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.38113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC GACAACTCGA AGCCTTTGCC GCCGTCATGT CGACGGGCAG CGTCACCGCA
GCGGGCAAGC TGCTGGGCCG CTCCCAACCG GCCATCAGCC GGCTCATCCA GGACCTGGAA
GCGGAGATCG GCTATGCGCT GTTCACCCGC TCGGGGCCGC GCGTATCGCC CACCGAGCAG
GGCTTCCTGC TCTATGAGGA CGTCGAACAC ACCCTGATCA GCCTGCGCCA GATCCGCACG
CGCGCCGAGG AAATCGCGCG CGGCGAGGCG CGGCCGCTGC GCCTGGCTGC CACCTCGGCG
CTGGCGGCCG GGCTGCTGCC GGCGGCCCTG GCCGATGATG CCGAACTCGG CCGGCATATC
CAGATCCGCA GCGCATCGCC CGAGCAGGTG GTGCATGCGG TGCTGACCGG CGCGGCCGAC
CTGGGCGTCA GCAGCCTGCC GCTGGAGCAC CGCGGAGTGA CCGTGCACTG GATCGGCGAA
GCCGCCTGCG TGGCCGCCGT ACAGGCGGGC GATCCGCTGG CCGCGGGCGA CCGCGTGGCG
CTGGCCGACT GCGGCGGGCG CCGCATCATC ACCATGCACA ACCCGTATCG GCTGCGGCGC
CGGCTGGACT TTGCCCTGGC GCAGGCCGGT GTCACGCCCG CCGAGCTGAT CGAGACCAAT
GCGTCGTTCA ATGCCCTGAC CACCGTGCGC GCGGGCCTGG GCGTGGCGCT GCTGGAACCC
GTCACGGCCT ACGGCGTGCC GATCGAGGGC GTGACGGTGC GCCCGATCGA TGTGAGCATC
CCCTTCTTCT TCGGCGTGAT CACGCCCGAG GCGCGCCGGC CGTCGCCGGC TGTGACCGCG
CTGATCGACG CCCTGTCCCG GGCCGCGCAG CGCCTGCTGC CCGATTGCAA GCTGCATGAC
CCGGCCCGCC ACGCCAGCAT GCTGCAGGTG CTGTACGGCG AACCGCTCAA CGAAACCGAA
GGCGCGTCCG CATGA
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| Protein sequence | MELRQLEAFA AVMSTGSVTA AGKLLGRSQP AISRLIQDLE AEIGYALFTR SGPRVSPTEQ
GFLLYEDVEH TLISLRQIRT RAEEIARGEA RPLRLAATSA LAAGLLPAAL ADDAELGRHI
QIRSASPEQV VHAVLTGAAD LGVSSLPLEH RGVTVHWIGE AACVAAVQAG DPLAAGDRVA
LADCGGRRII TMHNPYRLRR RLDFALAQAG VTPAELIETN ASFNALTTVR AGLGVALLEP
VTAYGVPIEG VTVRPIDVSI PFFFGVITPE ARRPSPAVTA LIDALSRAAQ RLLPDCKLHD
PARHASMLQV LYGEPLNETE GASA
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