Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1842 |
Symbol | |
ID | 1220680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2023255 |
End bp | 2023647 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637238234 |
Product | transposase |
Protein accession | NP_519963 |
Protein GI | 17546561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0113266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGC CCGAGGCCAT CACCATGACG ATGCGCGAAC TGGACCGACT CAAGGTGATT CAAGCAGTGG TTGACCATGG CTTGGCGGTT TGGCGCGCCG CTGAGCGGCT CGGCTTGTCC AGGCGGCACG TCGAACGGCT GGTGCTGCGC TATCGTGAGG ATGGGCCACA GGGATTGTGC TCGCGTAAAT GGGGCCAACC AGGTCACCAC CAACTGCCGC CCGGCCTCGA ATCCCGCGTG TGTGGCCTGA TCCGCGACAG CTATGCGGAC TTCGGCCCGA CCCTGGCGGC CGAGAGGCTG CGTGAGCGCC ACGGCATCGA GATTTCCAAG GCCTGTGTGC GCCGGATCTG GTCAAACGCC AGGCGCTACA GCAGGCCAAT GCCCGGCTGC TGA
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Protein sequence | MPKPEAITMT MRELDRLKVI QAVVDHGLAV WRAAERLGLS RRHVERLVLR YREDGPQGLC SRKWGQPGHH QLPPGLESRV CGLIRDSYAD FGPTLAAERL RERHGIEISK ACVRRIWSNA RRYSRPMPGC
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