Gene RSc1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1842 
Symbol 
ID1220680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2023255 
End bp2023647 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID637238234 
Producttransposase 
Protein accessionNP_519963 
Protein GI17546561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0113266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC CCGAGGCCAT CACCATGACG ATGCGCGAAC TGGACCGACT CAAGGTGATT 
CAAGCAGTGG TTGACCATGG CTTGGCGGTT TGGCGCGCCG CTGAGCGGCT CGGCTTGTCC
AGGCGGCACG TCGAACGGCT GGTGCTGCGC TATCGTGAGG ATGGGCCACA GGGATTGTGC
TCGCGTAAAT GGGGCCAACC AGGTCACCAC CAACTGCCGC CCGGCCTCGA ATCCCGCGTG
TGTGGCCTGA TCCGCGACAG CTATGCGGAC TTCGGCCCGA CCCTGGCGGC CGAGAGGCTG
CGTGAGCGCC ACGGCATCGA GATTTCCAAG GCCTGTGTGC GCCGGATCTG GTCAAACGCC
AGGCGCTACA GCAGGCCAAT GCCCGGCTGC TGA
 
Protein sequence
MPKPEAITMT MRELDRLKVI QAVVDHGLAV WRAAERLGLS RRHVERLVLR YREDGPQGLC 
SRKWGQPGHH QLPPGLESRV CGLIRDSYAD FGPTLAAERL RERHGIEISK ACVRRIWSNA
RRYSRPMPGC