| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1833 |
|---|
| Symbol | |
|---|
| ID | 1220671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2004550 |
|---|
| End bp | 2005443 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637238225 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | NP_519954 |
|---|
| Protein GI | 17546552 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.714906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGT CTGCACTCAA GAACCCCCTG CTGGGCGTCC TGGCCTGTGC CGCCAGCATG
ACCGCGGCGC ATGCCACCGA AGGCGGTGGC CTCGCCATCT ATCCGGATGG CCTGGAGAAC
TACCTGGTCG GCGCGCTGCC GCCGCCGGGC GTGCATGCCC TGGTCTACGC CGGCGCCGCG
CGCTACGACA CGCTGCGCGG CAACAGCGGC CAATCCCTGC TGCAGGACTT CAAGGTTGAT
GTCAACGTAC TGGCGCCGCG CCTGATCTGG GTGACGCCCG CGCAAGTGTT CGGCGGGCAA
CTGGCGTTCC ACGCCATCGC CCCCCTGCTC GACGTCGACT TCCGCGCCAA CGGCGCGCGC
TTCAAGAGCT CGGGGCTGGG CGACATCACG CTCGGTACGG CCCTCGGGTA TCACGTCTCA
CCGGCGCTCC ACTATGTGAT CGGCCTCGAC GTGTTTGCGC CGACCGGTCA TTACGATCCG
ACCGCCCCCT CGAGCCTGGG CAAGAACTAC TGGACGGCGC AACCGCTGGC CGCCATCACC
TACATGCAGC CCACCGGCTT CAACGGCGAC CTGAAGGTGA TGTACGACCT CAACTTCCGC
AACACCCGGA CGGACACCCG CTCGGGCCAG GCCATCCATG CCGACTACAG CGCCGGCTGG
GGTATCGGCA ACGGCTGGGT GCTCGGGGTG GGCGGGTATG TCTACCAGCA GACCACGAAC
GACCAGGGCC CCGCCGCCGC CCAGGGCAAG GCCCGGGCGC TGGCGGTGGG CCCCTCCATC
CGCTATGCGA ACGATCGGGG CTGGCTCCTG ACCGTCAAGT GGCAGAAGGA ATTCGAAGTG
CGCAACCGGC CTTCCGGCAG CCAGTTCTAC GTCAAGGCTT CCATTCCCTT CTGA
|
|---|
| Protein sequence | MRKSALKNPL LGVLACAASM TAAHATEGGG LAIYPDGLEN YLVGALPPPG VHALVYAGAA
RYDTLRGNSG QSLLQDFKVD VNVLAPRLIW VTPAQVFGGQ LAFHAIAPLL DVDFRANGAR
FKSSGLGDIT LGTALGYHVS PALHYVIGLD VFAPTGHYDP TAPSSLGKNY WTAQPLAAIT
YMQPTGFNGD LKVMYDLNFR NTRTDTRSGQ AIHADYSAGW GIGNGWVLGV GGYVYQQTTN
DQGPAAAQGK ARALAVGPSI RYANDRGWLL TVKWQKEFEV RNRPSGSQFY VKASIPF
|
|---|
| |