Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1827 |
Symbol | |
ID | 1220665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1997181 |
End bp | 1997627 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238219 |
Product | putative 4-hydroxybenzoyl-COA thioesterase protein |
Protein accession | NP_519948 |
Protein GI | 17546546 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.115256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCGA ATCCATGCCA GTTCAGCCGC CCCCACCGCA TCCGGTTCGC CGAGTGCGAC CCGGCCGGCA TCGTGTTCTA CCCGCAGTAC TTCGTCATGT TCAACAACCT GCTCGAGGCC TGGATCGACA GCCTGCTGCC GGACGGCTTC GCGGGCTACA TCGGCAAGCA AGGCTACGGG CTGCCGACGG TCCGGCTGGA AGCGGACTTC CGCGCGATCA GCCGCATGGG CGATGACGTG ACGCTGAGCC TCGAAGTCGT GCGCCTGGGC GGCAAGTCGC TGACGCTGGC CCTTGCCTGC ACGGGCAGCG ACGGCGAGGT CCGCATGAGC GTCAATCAAG TGGTGGTGTC GACCTCGCTG ACGACGCACC GCGCCATCGA TATCCCGCAG GCCCTGCGGC AAGCCCTGAC CGCGGCCCCC CTCAACGCAA CAAGGAGCGC ATCGTGA
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Protein sequence | MHPNPCQFSR PHRIRFAECD PAGIVFYPQY FVMFNNLLEA WIDSLLPDGF AGYIGKQGYG LPTVRLEADF RAISRMGDDV TLSLEVVRLG GKSLTLALAC TGSDGEVRMS VNQVVVSTSL TTHRAIDIPQ ALRQALTAAP LNATRSAS
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