| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1810 |
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| Symbol | |
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| ID | 1220648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1964976 |
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| End bp | 1972118 |
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| Gene Length | 7143 bp |
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| Protein Length | 2380 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238202 |
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| Product | polyketide synthase protein |
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| Protein accession | NP_519931 |
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| Protein GI | 17546529 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00517] acyl carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.362155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.526323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTC TCACTCCCGA AGCGTTCCAG CAACGCTATG GCGACACCCT GCCCATCGCC
GTGATCGGCG CGGGCTGCCG GATGCCGCGC GCCGATGACA TCTTCGCGTT CTGGCACCGC
CTGGCCGACG GCGAGGACCT GATCGCGCGC TTCGATGCGC GGCAACTGGC CGACGCCGGC
ATCGACCCCG CGCTGCTGTC GCGGCCCGGC TATGTGCCGG CCGCCGCCGT GATCGAGCAG
GCCGACCGCT TCGAGTGGTC GTTCTTCGGC TACTCGCGAC AGGAGGCCGA GACGATCGAT
CCGCAGCAGC GCATCTTCCT CATGTGCGCC TGGGAGGCGC TGGAGATGGC CGGCTACCCG
AGCGCCACCC TGGAGGCCGC ATGCCCGGGC GCGCGCATCG GCGTGCTGGG CGCCTGCAAG
ATGAGCAGCT ATCCGGCGGC CCGGATCGAG AACACGCAGG AGATCGCGTC GCCCCGCACC
TTCGGCCGCC TGCTCGGCAA CGACAAGGAC TACCTCGCCA CCCGGGTGTC CTACAAGCTC
GGACTGACCG GCCCCAGCAT GACGGTGCAG ACCGCCTGCT CGAGTTCGCT GGTGGCGATC
CACCTCGCCT GCGAGCAACT GGCCAGCGGC GAATGCGACA TGGTGCTGGC CGGCGGGGCG
GGCATCGGCT TTCCGCAGGA GAGCGGCTAC TTCCATCGCG AAGGCATGAT CTTCTCGCCG
GACGGCCTGT GCCGGCCGTT CGACGCCCAC GCCGACGGCA CCGCGATCGG CAACGGCGCC
GCCGTGGTCC TGCTCAAGCC GCTGGACCGC GCGCTCGCGG ACGGCGACCC GATCCTCGCC
GTCATCCGGG GCAGCTCGGT CAACAACGAC GGCCGCGCCA AGGCCGGCTA CACCGCGCCC
TCGCCCGAGG GGCAGGCCCG CGTCATTGCC GATGCGCTGG CGCTGGCGGA AGTCGATCCG
GCCTCGATCC ACCTGATGGA AGCGCACGGC ACCGCCACGC CGCTGGGCGA CCCGATCGAG
GTCGAAGCGC TGCGCCGGGC GTGGGGAGGC CCTACGGCGC AGACGCAATA CTGCGCGCTG
GGCTCGGTGA AATCGAATCT CGGCCACCTC GACACGGCGG CCGGCGTGGC GAGCTTCCTG
AAGGCGGCGC TGGCCCTGCA CCATGGGCAG ATTCCGCCGA GCCTGCATTT CGAGACGCCG
AATCCCGCGC TCGATCTTGC CTCCAGCCCC TTCTTCGTCC CGCAGACGCT GCTGCCCTGG
CCCGACACGC CGACACCGCG CCGCGCCGCC GTGAGTGCGT TCGCCATCGG CGGCACCAAC
TGCCACGCCA TCCTCGAACA GGCGCCGCAC GTCGCCCATG ACGGCGCGGC CGAGACCGGC
CTGCCGCGGC TGCTCGTGCT GAGCGCGCGC AGCGAGACCG CCCTGCGCGA ACTCGCCCGC
CGCCACGCAT GGCGCCTCGA CGACCTGGGC AGCCAGGTCG CCCTGTCGGA CTACTGCGCC
ACCGCCGTGC ACCATCGCAG CGTGTTCGAC TGGCGCCTGG TGCTGGTCGC CACCGATGCC
GCGTCGTTCA TCGCGCAGTT GCATGCCTTT GCCGAACAGG CCGATGGCCA GGCGCAGGCC
GTTCAGGCGC CGGCGGGCTG CGCCGTCCGC GCCTGGATGG CCGGTGCCGG CGATGATGCG
CTGCTGGCGT TCGCGCGCGA GCAGGCCGTG CAGCCATGCC CGGACTGGAG CCGGCATTGC
CCGCCGCCGG CCACCCGCGT GCTGCTGCCG ACCTGCCCGT TCGAGGGCGA GCGCTGCTGG
TTCGAGGGGC ACGAAGCGCA GCAGCCCCCG GCCTCGCCCG CATCTGAGGA CGCTCCCGCG
CACTGGCAGG CCGCCGTGCA GGCGGGGCGG CATGCGGCCG CGACGCTCGG CGGGCAGCTC
GATCTGTCCG GCCTGCCGCG CGAGGCGCAA GGCGTGGATG CCCTGCACGC CACCTACGTC
GGTCAGGCGT TTGCCCAACT GGGCGTGTTC GCCGACACCG ACGCCTGGCT CGACGTGGAG
GCCTGCCTGG CGCGCGGCGG CGTGCCCGCG CGCCATCGCG ATCTGCTCGG CCGGTTGCTG
CGCGATCTGG CATCGGCCGG CGCGCTGGAC GCGCGGCGCA TCGACGGCCG CCCGCACTAT
CGCAACCTGC GCCCGCGGCC GATGCAGGAC GCGCAGCCGT GGCTCGAGGC CATGCGCGCC
CTCGGCTACG GGCAGCTTGC CCCGCTGGTG GAGCGCACCG GCCCCCGCCT CGCCGACATG
CTGACGGGCA AGCGCGATCC CGTCGGCGTG GTGTTCCCCG GGGCCGCCAC CGACGACGTC
GAGCACATGT ACCAGGAGCA GCCGAATTCG GTCTACCTGA ACCGCATCGC CGCCGCGACG
GCCGCGGCCC TGGCCGAGCG CCGCGCGCTG CGCATCCTCG AGGTGGGCGG CGGCACGGGA
GGCACCACGC GCGACGTGCT CGCGCACTTG CCGCCGGGCG CCTGCGAGCG CTACACATTC
ACCGATGTCG GGCCGCTCTT TCTGCAGCGC GCGCGCATCA AGTTCGCGGA CGCGCCGTTC
ATGCAATTCC AGATCTTCGA CATGAACGCG CCGGCCGTCG CCCAGGGGCT CGATCCGGCC
GGCTATGACC TGATCGTCGC GGCCAATGTG CTGCACAACG CGGCCGACCT GCGCCGCATG
CTCGCCAACC TGGGGACGGT GCTGGCCCCG GGCGGGGTCC TGCTGATGCG CGAGATCACC
GCGCCGAAGA AGCTCTTCGA CTTCGTGTTC GGCCCGCTGG TGCCGCCGAT CGACGACACC
GCCGCGCGCG CTGGCGAACT GTTCGCCAGC GAAGCCGTCT GGCGGGCCGC GCTGGCCGAT
GCGGGGTTCA CGCGCGCCGA GGCGTTTCCG GACCGCGCCA GCCCGGCCGG CGCGCTGGGC
GAGCAGATCC TGATCGCGCA CGGGCCCGTG GCACGTCACG ATGTCTCGAC GGCGCCGGTA
CCGGTACCGC AGACGGCGGC GCTATCCGGC GGGGTGCGGC AGATCGATCT CACCGTGGAG
GATCCGGCCC CCGGGCAGCT GATCGCGCGC ATCCTCGCGG CGCTGCCCGA GCCCGGCCGG
CTGCGCCTGG ACGACCTCCA ATGGCGCCTC GACCCCGCGG GTGCGCCGCT GCCGCTGCGC
CTGAGCCTGC TGGTCGCGGA CGACGTGCTG CATGTCGGCA TCCACGGCAC GCCCCACGGC
ATGCAGCCCT TGCTGCGCGC ATCGCTGGCA CGGCCGCGCG CGTTGCCGGC CCGGCTGCAC
GCGATGGCGG GCACGACGCT CGGCCTTGGC GACGATGCAC GGGGCCCCGC CTTGCTCGAC
GCGGCGCTGT CCGCCGTGCA GGCGCCGGAC GGCCGCCCGC ACACCCTGCG CAACCTGAAG
TCGCTCTACT GGCCGGCCCC GACCGGACCG GCGCGCGACG CGCGGCTGCT CCGGCAAGGC
GAGCGCGCGA CCGTCTGCGA CGCCGGCGGC ACCGTCCTGC TGGCCATCGA GGGCTGGCAG
GATGCGCCGC CGCTTTCCGC CCCCTGGCGC GGCGGCGAGG CGGCCGGCAT GCTGTACCGG
TGGCGCTGGA CGCCGGTTTC CGCGCCGGCC TGCGCCACCG CGATCCGGCG TGTCATGTGG
CTCGGGCAGA ACAGCATCGC GGAGCGCCAG CAGCTGACCG AGGCCTTCGG CTGCCTCGGC
ATCGCCTGCA CGTTCGGGAA CCCCGCCGAC CTGCTGCGGG ACGAGACCCG CCTGCCGGAC
TGGCTGGCCG GCGCGGACCG GGCCGACGCG ATCTGCTACG CCCCGCTCTA CCATGCGCAA
GCACGCGCGG AGGCCATCCT CGACGAGCAG GTCGAGGCGC TGCGCCCGCT GGCCATGCTG
GTTGCCGCGC TCGGCGCCCG CTCCGATCCG CCCAGGCTGG CGGTGCTGGC GCCGCACGCC
TTCGCGGTCG AAGACAGCGA CACCGCTGCC GGCTGGCAGG CGGCGGGCAT GTCGGGGCTG
CTCGCGATCG CACAGCAGGA ATATCCCGCG CTCCAGACGC TGCTGCTCGA CAGCGGCGCG
TCGGCGCCGA TGGGCTTCGT GCCGGCGCTC GCGGCCTGGC TGGCCTGCGG CGCGGTTCCG
GTTGGTGCGC TGCGCGGCAC GCAGCACTAC GTGCAGCAGC TCATCCCCGC CGCCCCCGCG
CCGTGCCTCG CGGCATTGCC GCCCGGGCGC CACGTGCTGA TCGGCGGGCT TTGCGAACTC
GGCTTGGCGC TGGCGGACTG GCTGGCCGCG CGGGGCGCGC GCGAACTGGC GATCCTCTCG
CGCAAGCCGC CGACGGCGGC ACAGGCAGCG CGGCTGGCCG TGCTGCAGGC ACAGGGCGTC
GACGTGCGCC TGGACAGCCG CGCCGACGCC ACCGAGCCGC CGGCCTTCGA TGCCGCGCTG
ATGCGCCTGG GCGGTAGTGC ACCGGTCGGC TGTGTGTTTC ATCTGGCCGG CATCGTGCGC
GACGCGCCGC TCGCGGCCGC CGACTGGCGG GACTGGCAGG CCACGCTGGC GACCAAGCTG
GTGCCCGCGC TGGCGCTGCA TGCCCGGGAG GCCCACCTGC GGCCCGCGAT GACGGTGTAT
TTCTCCTCGG CGGCCAGTGC CTGCGGACCA GCCGGGCAAG GCGCGCACGC TTCGGCCAAC
GCCGCGCTCG AAGGGCTGGC GCACTACCGC AGCCGCCTGG GTCTGGACAC CGTCGCGCTG
GCCTGGGGCT TCTGGGGCGA CATCGATGCC GAGCGGCGCC GCGAACTGGC CGGCCGCCTG
GCCGCGCGGG GCATGGCGGG CCTCGGCACG GCGCACGGCA TGACGCTGAT GGCGCAGGCG
ATGGCCGGCC CCGAGCCGTT CTACCTGCCC GCTCGCATCG ACTGGCCGCG CTTTGCCACG
ATGGCCACGC GGGCACAGGC GGAACGCTTC GGCCCCTGCT GGCAGGCTGC CGCCCGGACG
GACGCCGCTG CCACCGAATC GCCCGCCCGG GCCACGGCCC AGCCCGTCGA CTCGTTGTTC
GACACGGTCC GGGCCCGTGT CGCCGAAGTC CTGGGCCGCG ATGCGCAGGC CATTCCGGCC
GAGGCAAACC TCATCCAGCT GGGACTCGAT TCGCTGCTCT TCCTCGACTT GAGCGAGCGG
CTCGGCAAGC AGTTCGGCGT GTCGATCTCG GCGGAGACCG CGTTCAAGGC CAACACGCTG
AACGCTTTCG TGCAGGCCCT CGCCGCGCAG CTCGGCCTGG ACGATGCGGG CACCGACGTC
CGCCGGCAAG ACACGCTGCC TGCGGAGGCT CCGCCCGCCG CACCCGCTAC GCTCGCCGCC
GGGCTGCGGC AGGGCAGCGG CGCCGTGGAC ATCGCCGCGG TCCGGCAGTA CCTGCGCGCA
GGCATTGCCA CGCTGCTGCA CTGCGCGCCG GACACCATCA CGGACCAGGC CAACCTGATC
CAGCTCGGCC TCGATTCCCT GCTGTTTCTC GAACTGTGCG AGACCATCGC GCGCGAGCTC
GATGTGCGGA TCTCGGCCGA CACCGCCTTC CGGGCCGGCA CCTTCGAGGC GCTGGCCGAT
GGCCTCGCGC AGGCCCTGGG CGTGCGGCGC GGCGGCACCG GCACGCAGGC CCCGGCAGCC
GGCGCCTGCG GCCTGCGCAT GGCGCTCACT GAACTGGAAC AGTCGCAGGG CGGCTGGCTG
GCCGCCAACG GCGACATGCT GCCGCGCCCC GACGCCCCGG GCACCCCCCT GCCCCTGCCG
GGCCTGCGGG GCCTGCGCCG CCAGCTGCGC GAATCCGACG TCCCGCAGCA GCTGTACGTG
GAATACGACA AGCCGGCGGA CTTCCCGCTC GCGCGCTTCG AGCAGGCGTG GAACCGCGTG
GTCGAACGCC ATCCGATGCT GCGTGCGACG GTCAGTGCGG ACGGGTTGCT GCGCATCCTG
CCCGAGGCCC CGCGCACCGT CATCGCGCAC ACCGATTGGC GCGGCCAGCC CGCAGCCGAA
CGCGACGCGG CACTGGCCGC GCTGCGCGAG ACGCTGTCGC GGCAGCCCTT CGACCTGGCG
CAGTGGCCGC ATGCCGAATG GCGCGCGAGC CGGCTCGACG AGGCCACGCT GCGCCTGCAC
CTGCGCTTGG ATACCACGCT GGTCGACATC GAAAGCCTGC GCATCCTGCT GCGCGAGCTG
TTCCTGTGGG TGCAGGACCC GGCGCGCGCG CTTGCGGCGC CGCGGTTTTC CGCGCGCGAC
TACTACGCCG GCGAAGCGGC GCTGCGCTTG ACCGACGCAC ATGCGCGGCA GTGGCAGGCC
TACGCCCCGC GCGTCGGGCA ACTGCCCCCG CCGCCCAACC TGCCGCTCAG GCAAGAGGCC
GGCACCGGCG CGCGGCGGTT CGTCATCTGG CGCGATGCCC TGCCGCGCGA TGCCTGGCTG
GCGCTGCGCG CCCACGCCGA GCAGGCCGGG CTGAGCGGCA CGGCCGCGCT GCTGGCGGCC
TATGCGCTGG CGCTGGCCCC CTGGAGCGAT CGCCGCGCCT TCACGTTGCG GCTCGACTAT
CCGGACCGCC GGCCGGTGCA CGCCCAGGCC ATGAACGTGA TGCTCGACGC CTCGGCCTCG
GCGCTGGTGC CGTGCGCGCT CGATGCCGGC AGCTTCATCG CACTGGCGCG TGCCTGCGCC
GAGGCGATCG CCGGCCGGCT CGCGGCGGAC CTGGTCGGGA CGGAAACGCT GTTGTCCGCC
CATTGCGCGC AGCACCTGGG CGCGGGGCAT CCGGCGCGGC TGCCGCCGGT GGCCATGACC
AGCCTGCTCG GCGTGCGCTC GGCCTATTCG ATTCCGGAGA CGTCCGACCC GCTGCTCGGC
ATGCCGACCC ACGAATACGC CAGCCAGCCC GATACCTGGC TGCACTTCCA GGCGCTGGAA
GAGGCCAGCG CGCTGCTCTA CAACATCGAC CAGCGCGCCG ACTGGCTGCC CGACGAACTG
GGGGAAACGG TGATGCTGCG CCTGCGGCTC GTGCTCGATG CGCTGGCGGA ATCCCCCGCC
GCCTGGCATG CGGCGCCGCT GGAGCTGGTG CCCGCCGATG CCGATATCGC CGGGTTCGCC
GCGGCCATGA CGCGCCTGCT CGATGCGGGG GGCATGGCCG TGGAGGCGGT GGCCCGGGAT
TGA
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| Protein sequence | MTSLTPEAFQ QRYGDTLPIA VIGAGCRMPR ADDIFAFWHR LADGEDLIAR FDARQLADAG
IDPALLSRPG YVPAAAVIEQ ADRFEWSFFG YSRQEAETID PQQRIFLMCA WEALEMAGYP
SATLEAACPG ARIGVLGACK MSSYPAARIE NTQEIASPRT FGRLLGNDKD YLATRVSYKL
GLTGPSMTVQ TACSSSLVAI HLACEQLASG ECDMVLAGGA GIGFPQESGY FHREGMIFSP
DGLCRPFDAH ADGTAIGNGA AVVLLKPLDR ALADGDPILA VIRGSSVNND GRAKAGYTAP
SPEGQARVIA DALALAEVDP ASIHLMEAHG TATPLGDPIE VEALRRAWGG PTAQTQYCAL
GSVKSNLGHL DTAAGVASFL KAALALHHGQ IPPSLHFETP NPALDLASSP FFVPQTLLPW
PDTPTPRRAA VSAFAIGGTN CHAILEQAPH VAHDGAAETG LPRLLVLSAR SETALRELAR
RHAWRLDDLG SQVALSDYCA TAVHHRSVFD WRLVLVATDA ASFIAQLHAF AEQADGQAQA
VQAPAGCAVR AWMAGAGDDA LLAFAREQAV QPCPDWSRHC PPPATRVLLP TCPFEGERCW
FEGHEAQQPP ASPASEDAPA HWQAAVQAGR HAAATLGGQL DLSGLPREAQ GVDALHATYV
GQAFAQLGVF ADTDAWLDVE ACLARGGVPA RHRDLLGRLL RDLASAGALD ARRIDGRPHY
RNLRPRPMQD AQPWLEAMRA LGYGQLAPLV ERTGPRLADM LTGKRDPVGV VFPGAATDDV
EHMYQEQPNS VYLNRIAAAT AAALAERRAL RILEVGGGTG GTTRDVLAHL PPGACERYTF
TDVGPLFLQR ARIKFADAPF MQFQIFDMNA PAVAQGLDPA GYDLIVAANV LHNAADLRRM
LANLGTVLAP GGVLLMREIT APKKLFDFVF GPLVPPIDDT AARAGELFAS EAVWRAALAD
AGFTRAEAFP DRASPAGALG EQILIAHGPV ARHDVSTAPV PVPQTAALSG GVRQIDLTVE
DPAPGQLIAR ILAALPEPGR LRLDDLQWRL DPAGAPLPLR LSLLVADDVL HVGIHGTPHG
MQPLLRASLA RPRALPARLH AMAGTTLGLG DDARGPALLD AALSAVQAPD GRPHTLRNLK
SLYWPAPTGP ARDARLLRQG ERATVCDAGG TVLLAIEGWQ DAPPLSAPWR GGEAAGMLYR
WRWTPVSAPA CATAIRRVMW LGQNSIAERQ QLTEAFGCLG IACTFGNPAD LLRDETRLPD
WLAGADRADA ICYAPLYHAQ ARAEAILDEQ VEALRPLAML VAALGARSDP PRLAVLAPHA
FAVEDSDTAA GWQAAGMSGL LAIAQQEYPA LQTLLLDSGA SAPMGFVPAL AAWLACGAVP
VGALRGTQHY VQQLIPAAPA PCLAALPPGR HVLIGGLCEL GLALADWLAA RGARELAILS
RKPPTAAQAA RLAVLQAQGV DVRLDSRADA TEPPAFDAAL MRLGGSAPVG CVFHLAGIVR
DAPLAAADWR DWQATLATKL VPALALHARE AHLRPAMTVY FSSAASACGP AGQGAHASAN
AALEGLAHYR SRLGLDTVAL AWGFWGDIDA ERRRELAGRL AARGMAGLGT AHGMTLMAQA
MAGPEPFYLP ARIDWPRFAT MATRAQAERF GPCWQAAART DAAATESPAR ATAQPVDSLF
DTVRARVAEV LGRDAQAIPA EANLIQLGLD SLLFLDLSER LGKQFGVSIS AETAFKANTL
NAFVQALAAQ LGLDDAGTDV RRQDTLPAEA PPAAPATLAA GLRQGSGAVD IAAVRQYLRA
GIATLLHCAP DTITDQANLI QLGLDSLLFL ELCETIAREL DVRISADTAF RAGTFEALAD
GLAQALGVRR GGTGTQAPAA GACGLRMALT ELEQSQGGWL AANGDMLPRP DAPGTPLPLP
GLRGLRRQLR ESDVPQQLYV EYDKPADFPL ARFEQAWNRV VERHPMLRAT VSADGLLRIL
PEAPRTVIAH TDWRGQPAAE RDAALAALRE TLSRQPFDLA QWPHAEWRAS RLDEATLRLH
LRLDTTLVDI ESLRILLREL FLWVQDPARA LAAPRFSARD YYAGEAALRL TDAHARQWQA
YAPRVGQLPP PPNLPLRQEA GTGARRFVIW RDALPRDAWL ALRAHAEQAG LSGTAALLAA
YALALAPWSD RRAFTLRLDY PDRRPVHAQA MNVMLDASAS ALVPCALDAG SFIALARACA
EAIAGRLAAD LVGTETLLSA HCAQHLGAGH PARLPPVAMT SLLGVRSAYS IPETSDPLLG
MPTHEYASQP DTWLHFQALE EASALLYNID QRADWLPDEL GETVMLRLRL VLDALAESPA
AWHAAPLELV PADADIAGFA AAMTRLLDAG GMAVEAVARD
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