| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1804 |
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| Symbol | |
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| ID | 1220642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1941939 |
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| End bp | 1944437 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238196 |
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| Product | hypothetical protein |
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| Protein accession | NP_519925 |
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| Protein GI | 17546523 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2091] Phosphopantetheinyl transferase
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis
[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.80698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0920937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCA TCACGACGGA TCGGACACCC CCGGCGGCCG GCGCCGCCCT AGACCGCAAC
CGCAGCGCCT ATGCCGGCCT GGCCGACGTG CTGGAGCGCG CCGGCCTGGC CGAGCATGCG
CTGTACCTGA ACTGGGGCTA CCGGCCGGTC GACGGCCAGC CGGACTGGGC CGCCCGCGAA
CTGCCGCCGG GCGAACTCGG CCGGATGCAG GCACGCCTGG TCCTCGAGGT GCTGGGCGAC
ACGCCGCTGG ACGGCCGGCG CGTGCTCGAC GTCGGCTGCG GGCGCGGCGG CGCGCTCGCG
CTGATGGGCC GCCTGCATGC GCCCGCCGCC CTCGCCGGCG CCGACATCAG CGCCGCGAAC
ATCGCCTACT GCCGCAAGCG CCACACGCAT CCGCGCCTGC GCTTCCAGAT CGCGGACGCG
TGCCGGCTGC CCTATCCCGA CAGCAGCATG GATGTGGTCT TCAACCTGGA ATCGTCCGGC
GCCTATCCCG ACATCGGGGC GTTCTTCCAT CACGTGCACC GCATCCTCAG GGTGGGCGGG
CGCTTCTGCC TTGCCGACGT GTTCGATGCC GACAGCGTGG CGTGGGTCCG CGCCGCGCTG
GAGCAGGCCG GATTCACGCT TGAGCGGGAG CGCTCGATCC CTGCGCAGGT GCGCGCGGCG
CGCGAGCGCG CTTCGCCCGG CATCTGGCGC CGGCTGGACA CCGCGCTGAC CGCGCTCGAC
GCGCCCGGCC TGCGGCGGGA GCTGGAGCGC TACCTGGCCG CGCCATCGTC CGGGCTGTTC
CAGGCACTGG AAGACGGCCG CGTCGACTAT CGGCTCTTTC ACTGGCGCAA GACGTGCCCC
GCAGCCGGCC GGATCGATGC CGACGTGATC GCCCGGCTGG CCACGCGCTC CGCCCGGCTC
GATGCCGCGC TGCAGGATCG CGCGCCATCG GCCGCCGCAC CGCAGTCCCC CGCACCGGGG
CCGGCCAATG CCTCGGCGTC GGCCTGGTTC CCGTTCACTG CGCCCGACGC GCAGGCGGGC
TTCAACGTCT TCGCGCTGCC CTATGCCGGC GGCGGGGCCT CGGTCTACCG GGCGTGGACC
CTGCCGCGGC GCCCCGGCGC CGCCCCGTGG CAGCTCTGCC CGGTGCAGTT GCCGGGCCGC
GAGAGCCGCT TCGGCGAGCC GCTGATCGAT GACATGGCCA CGCTGGCCGA TCGCCTTGCC
GATGCCATCG GCCCCTATGC GCACCGGCCG TGGGCGCTGC TGGGCTGCAG CCTCGGCTGC
AAGATCGCCT TTGAAGTGGC GCGCCGCTTC GCGCGGCAGG GCCGCCCGCC CGCGCTGCTG
TTCCTGATGG CCTGCCCCGC GCCCGGCCTG CCGCTGGGCC GACGGATCTC GACCCGCGCC
GAAGCCGATT TCGCGCGCGA GGTATGCCAT CTCGGCGGCA CGCCCCCGGA AGTGCTGGCC
GACGCCGAGA TGATGCGCAC CCTCATGCCG ATCCTGCGCA ACGACAGCGC GCTGGCCGAG
CACTACGTCG CTGCCGAGGA CGCCACCGTC AACGTGCCGA TCGTCATGGT GGCCGCCGGC
GACGACCACC TCGTCACGGT GGAGGAAGCG CGGCGCTGGC AGCGCCATGC CGGCGCCGGC
TTCGACTGGC GCCTGGTGGA CGGCGGCCAC TTTTTCCTGC GGCAGCGGCG CCGGGAACTG
ACGGACTGGC TGCTGGACGC CCTGCGCCGC GGCGAGCGGA CCCTACCAGT GCAGACCACC
ACCACCGACG TTCCCGATGT TCCATGCAGC ACCCCCGAGC AGCCGCGCGA CCCGAGCCGG
ATGCCCGCCC CCGGCGCGAG CGCCAACCTC GTGCTGGCAC CGGGCGAGAT CCTGGTGGTC
ACGGCGCCCC GCAGCCTCGC CGCCCGCCTC ACCCCGGCTG TGCTGAGCGA CGACGAGCAG
CGGCAACTGG CGCGCTTCGC GTTCGACGCC GACCGGGAGC GCTACCTGGC CGCGCACTGG
GCCAAGCGCC GCGTGCTGGG CGCGCTGCTG GCGGCCGCAC CGCGATCGCT GCGCTTCGGG
GCACAGGCGG GCGGCAAGCC CTACCTGATT GGCGAGGCGC TGCATTTCAG CCTGTCGCAC
AGTGGCGACC GGGTTGCCGT GGCGGTCTGC CGGCACGCGC CCGTGGGCGT CGACATCGAG
CAGGCACGCG GCATCGCATG CCATGCGTCG GCCGCGCGGA TCATGCATCC GCTCGACCGG
ATCGCCCCGC AGTGCGAGAC CCCCGAAGAC CGCTTCCTCG CGGCCTGGAG CCTGAAGGAA
GCCGTCGCGA AATGCACGGG CGCAGGCCTG GCCCTGCCCT TCGACTCGCT GCGCCTCGCG
TTCGCCGGCA ACGGGCGGTA CGGCTGCCTC CTGGGCACGC ATGCGGCCTG GGAGGCACAT
CACCAGCATG AGGACGGCGT GCATCTCGCG GTCGCGAGCG CGACGCCGTG GGCGGCCCTG
CGCATCCTCC CGCTGGACGC GGCGCTCGCC GAGGGTTGA
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| Protein sequence | MMTITTDRTP PAAGAALDRN RSAYAGLADV LERAGLAEHA LYLNWGYRPV DGQPDWAARE
LPPGELGRMQ ARLVLEVLGD TPLDGRRVLD VGCGRGGALA LMGRLHAPAA LAGADISAAN
IAYCRKRHTH PRLRFQIADA CRLPYPDSSM DVVFNLESSG AYPDIGAFFH HVHRILRVGG
RFCLADVFDA DSVAWVRAAL EQAGFTLERE RSIPAQVRAA RERASPGIWR RLDTALTALD
APGLRRELER YLAAPSSGLF QALEDGRVDY RLFHWRKTCP AAGRIDADVI ARLATRSARL
DAALQDRAPS AAAPQSPAPG PANASASAWF PFTAPDAQAG FNVFALPYAG GGASVYRAWT
LPRRPGAAPW QLCPVQLPGR ESRFGEPLID DMATLADRLA DAIGPYAHRP WALLGCSLGC
KIAFEVARRF ARQGRPPALL FLMACPAPGL PLGRRISTRA EADFAREVCH LGGTPPEVLA
DAEMMRTLMP ILRNDSALAE HYVAAEDATV NVPIVMVAAG DDHLVTVEEA RRWQRHAGAG
FDWRLVDGGH FFLRQRRREL TDWLLDALRR GERTLPVQTT TTDVPDVPCS TPEQPRDPSR
MPAPGASANL VLAPGEILVV TAPRSLAARL TPAVLSDDEQ RQLARFAFDA DRERYLAAHW
AKRRVLGALL AAAPRSLRFG AQAGGKPYLI GEALHFSLSH SGDRVAVAVC RHAPVGVDIE
QARGIACHAS AARIMHPLDR IAPQCETPED RFLAAWSLKE AVAKCTGAGL ALPFDSLRLA
FAGNGRYGCL LGTHAAWEAH HQHEDGVHLA VASATPWAAL RILPLDAALA EG
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