| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1752 |
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| Symbol | livM |
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| ID | 1220590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1875019 |
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| End bp | 1876341 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238144 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_519873 |
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| Protein GI | 17546471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.550202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG TCATGTCGCA ACAACAGGCG TTGCCCGCCA ACGATCGCGC CCGCACGATG
CGGTTCAAGC CGCTCAACCT CGCGCGCTGG CTGATCTGGG GCACCACCGC GCTGGTGATG
CTCGTGCTGC CGCTGATCTG GCCGCAGGGC TTCGCCATCA CGCTGCTCTC GCAGATGGGC
ATCATGATCA TCTTCGCGCT GTCGTACAAC ATGCTGCTGG GGCAGGCGGG CATGCTGTCG
TTCGGGCACG CGGTGTACGC CGGCCTGGGC GCCTTCGTGG CGGTGCATCT GCTCAACCGG
ATCGGCGCGG CGCCGGCGCT CGGCATCGGC GGGCCGCTGG CGGTGGCGCT GCTGCCGGTC
GCGGGCGGGC TGGGCGGGGC GCTGTTCGGC GTGCTGTTCG GTTATGTCAC CACCCGGCGG
GCCGGCACCA CGTTCTCGAT GATCACGCTC GGCATCGGCG AGATGGTGTT CGCCAGCGCG
CTGATGCTCC CCGACTTCTT CGGCGGCGAG GGCGGCGTGT CGACCAATCG CAGCATTGGC
GAGCCGCTGC TGGGCATCAG CTTCGGGCTG GCGCGGCAGG TCTACTACCT GATCGCCGTG
TGGTGCCTGA TCTCGATGGC GCTGATGTAC GCCTGGACGC AGACGCCGCT GGGCCGCCTC
GCCAACGCGG TGCGCGACAA CCCCGAGCGC GTGGCGTTCG TCGGCTACAA CCCGCAGCGG
GTGCGCTACC TGGTGGTGAT CCTGTCGGCG TTCTTCGCGG GCATCGCGGG GGCGCTGTCG
TGCATCAACT TCGAGATCGT GACTGCGGAG AACGTGTCGG CGGTGCGTTC GGGGGCGGTG
CTGCTGGCGG CCTTCATCGG CGGCATGGGC ACGTTCTTCG GCCCGATCAT CGGCGCGGTG
CTGACGGTGT TCTTCACGGT GGCGCTGTCC GGCATCACCA AGGCGTGGCT GTTGTACCTG
GGGCTGTTCT TCGTGCTGAT GGTGATGTAC GCGCCGGGCG GCATCGCCAG CCTGCTGACC
ATGCATGCGC CGATCCTGCG GCGCGGCAAG CTGGGGACGC TGTTGCCGGC CTACGGCGTG
GCGATCGTGC CGGCGCTGGT GCTGCTGGCC GCGCTGATCG CCACCGTGGA AATGATCTAC
GCCGTGCAGG ACGACAGCGC GGGTGGCGTG GCGACGCTGT TCGGCTTGTC GGTGCAGCCG
GCCACCTGGA CGCCGTGGGC CGTCACCGCC GTGCTGTGGG CGGCGGGCGG GGGCGGCCTG
CGCATCGCGG CGGGCCGGCT GCGCGCCGCC TGGGATCTCG CCTTGCAGGA GCGTCAGCCA
TGA
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| Protein sequence | MDRVMSQQQA LPANDRARTM RFKPLNLARW LIWGTTALVM LVLPLIWPQG FAITLLSQMG
IMIIFALSYN MLLGQAGMLS FGHAVYAGLG AFVAVHLLNR IGAAPALGIG GPLAVALLPV
AGGLGGALFG VLFGYVTTRR AGTTFSMITL GIGEMVFASA LMLPDFFGGE GGVSTNRSIG
EPLLGISFGL ARQVYYLIAV WCLISMALMY AWTQTPLGRL ANAVRDNPER VAFVGYNPQR
VRYLVVILSA FFAGIAGALS CINFEIVTAE NVSAVRSGAV LLAAFIGGMG TFFGPIIGAV
LTVFFTVALS GITKAWLLYL GLFFVLMVMY APGGIASLLT MHAPILRRGK LGTLLPAYGV
AIVPALVLLA ALIATVEMIY AVQDDSAGGV ATLFGLSVQP ATWTPWAVTA VLWAAGGGGL
RIAAGRLRAA WDLALQERQP
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