| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1716 |
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| Symbol | |
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| ID | 1220554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1835805 |
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| End bp | 1836497 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238108 |
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| Product | putative signal peptidase I (SPase I) protein |
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| Protein accession | NP_519837 |
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| Protein GI | 17546435 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.215553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGC TGGCGAAATC ACTGAAAGCG GCACGGGACA ACAAGCGGTT CCTGGTCGGC
ATGTCGCTGC TGCTCGCATT CCGGGCCTGC GTCGCCGACT GGTCGGTCGT GCCGAGCGGC
TCGATGAACC CGACGCTGAT CGAAGGCGAT TTCATCCTGG TGAACCGCCT CGCCTATGGC
ATCCGGGTGC CGGCCACCAC CGTCTGGCTC AAGCGCGGCA ATGAACCGCG CCGCGGCGAC
GTCGTCGTGT TCTCATCGCC CGAGAACGGC ACCAAGCTCG TCAAGCGCCT GATCGGGTTG
CCGGGCGATG TGGTCGAGAT GCGCGGCGAA GCGCTCTACA TCAACCACCA GCGCCTGGCC
TACACGCCGC TGCCCGATGT CGCGCCCGGC GCCCTGCCGC AGGCAACGGC CGCCCAGCCC
CACGACCTGT GGACCGAGGC CCTGCCCGAC CACCCGCACC CGGTGATGGT GCTACCCAAG
GTGGCCGCGC TGCGCAGCTT CGGCCCCATC GTCGTGCCGG CCGATCAGTA CCTGATGCTC
GGCGACAACC GCGACAACAG CCGGGATTCC CGCTACTTCG GCCTTGTGCC ACGGCAGAAC
CTGATCGCGC GGGCATCGCA CGTGGCGGTA TCGTTCGATC CCGATCACTG GTACCTGCCG
CGCCTCGCGC GCATCGGCCG GCCGCTCGAC TGA
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| Protein sequence | MKLLAKSLKA ARDNKRFLVG MSLLLAFRAC VADWSVVPSG SMNPTLIEGD FILVNRLAYG
IRVPATTVWL KRGNEPRRGD VVVFSSPENG TKLVKRLIGL PGDVVEMRGE ALYINHQRLA
YTPLPDVAPG ALPQATAAQP HDLWTEALPD HPHPVMVLPK VAALRSFGPI VVPADQYLML
GDNRDNSRDS RYFGLVPRQN LIARASHVAV SFDPDHWYLP RLARIGRPLD
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