| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1704 |
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| Symbol | tISRso18 |
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| ID | 1220540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1820273 |
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| End bp | 1821238 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637238094 |
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| Product | ISRSO18-transposase protein |
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| Protein accession | NP_519825 |
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| Protein GI | 17546423 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0125656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.151951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA CCGACCTTGG CCTGGACCTG AGCAACCGGC GCACGCGCAA GCAGGTATTT
CTCGACGAGA TGGAGCGCGT GGTGCCATGG CAGGCGTTTT TGGCGCTGAT AGCACCGCAT
GCGCCGACCA AGGCGACCGG CCGCAAGCCG TTTCCAATCG AGGCGATGCT GCGCATCCAC
TTGTTGCAGC AATGGTTCGG GCTGTCGGAC GTGGCGATGG AAGAGGCGCT GTACGACGTG
CCGTTGTATC GTCAATTCGC GGGTCTGGGT GGCATGAGCC GGCTGCCGGA CCGGGTCAGC
ATTCTGCGCT TCCGGCACTT GCTGGAGCGG CACAAGCTGG CCGAGCAGTT TCTGCAGACC
GTCAACGAGC AACTCAGTGC CAAGGGGTAC CTGCTCAAAG AGGGCACGGC GGTCGATGCC
ACGCTGATTT CCGCGCCCAG CTCGACGAAG AACCAAAGCG GCGAGCGCGA CCCTGAGATG
CACCAGACCA AGAAAGGCAA CCAGTGGCAT TTCGGCATGA AGGCGCACAT CGGTGTGGAT
GCAGACTCGG GGCTGGTGCA TACCGTGGTG GGCACGGCGG CCAACGTCAA CGATGTTACG
CAAGCGCATG CTCTGGTGCA TGGCAAGGAG GCCGATGTGT TCGGCGATGC CGGCTACCAG
GGCATCGACA AGCGCGAGGA AGTGCAGAAG CTGAAGGTGC GTTGGCATGT GGCATTGCGC
CCGGGCAAGC GCCGCGCCTT GGACAAGAAC ACCGCGCTGG GCAAGCTCGT TGATGAACTG
GAACGGGTCA AGGCGCGCAT CCGTGCCCGC GCGGAACATC CGTTTCGTGT CATCAAGCGC
CAGTTCGGGC ATCTGAAGGT TCGCTATCGC GGCTTGATGA AGAACACGCA ACAGTTGCAC
ACGCTGTTCG CCCTGAGCAA CCTGTGGATG ATGCGCGGGC GACTGATGGG TGAGGCCCGC
GCATGA
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| Protein sequence | MKQTDLGLDL SNRRTRKQVF LDEMERVVPW QAFLALIAPH APTKATGRKP FPIEAMLRIH
LLQQWFGLSD VAMEEALYDV PLYRQFAGLG GMSRLPDRVS ILRFRHLLER HKLAEQFLQT
VNEQLSAKGY LLKEGTAVDA TLISAPSSTK NQSGERDPEM HQTKKGNQWH FGMKAHIGVD
ADSGLVHTVV GTAANVNDVT QAHALVHGKE ADVFGDAGYQ GIDKREEVQK LKVRWHVALR
PGKRRALDKN TALGKLVDEL ERVKARIRAR AEHPFRVIKR QFGHLKVRYR GLMKNTQQLH
TLFALSNLWM MRGRLMGEAR A
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