Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1703 |
Symbol | |
ID | 1220539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1819464 |
End bp | 1820009 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238093 |
Product | bacteriophage-like signal peptide protein |
Protein accession | NP_519824 |
Protein GI | 17546422 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0913733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.138015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGCA TCAAGGGAAC GGCCATCGCG GCCGCGATCG CGATGCTGCT GGGGGCGCTT GTCGGCGCTG CAGGTGCGTG GACATGGCAG GCGCACCGCT ACGACAAAGA CATCGCCACG CTGCAGCGTG ATCAGGCGGA GAAGGATCGC CAGCAGGCCC GCGCCGACGA GGCGCAACTG CGGCAGGAGC GGGAAAAGCG CGCGGGGCTG GAGCGCCAGC TCGGCGAGCT CGACGCACGT CACTATGAGG AACTGAACAA TGCCAAAACT GAAAACGCGC GCCTGGCTGC TGCTCTTGCT GCCGGCACTC GCCAGCTGTC AATCCGCGCC CGTTGTACAG CCCCGGCCGA CGGCGTGCCA AGCACCACCA GCGGCGCCGG CCTGGGCGAT GGTGGCGCCG CCACAGCAAT CCTTTACGGA GAGGATGCAG CGGATATTCA AGCTCTCGTC GCCGACGCAG ATGCCATCGC AGCAGCCTTG AGGTTTTTTC AGGGCCGAGA GCGAGCAATC CAGACGCGGG ATACATCCGT GGATGCTCGG CGATGA
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Protein sequence | MPGIKGTAIA AAIAMLLGAL VGAAGAWTWQ AHRYDKDIAT LQRDQAEKDR QQARADEAQL RQEREKRAGL ERQLGELDAR HYEELNNAKT ENARLAAALA AGTRQLSIRA RCTAPADGVP STTSGAGLGD GGAATAILYG EDAADIQALV ADADAIAAAL RFFQGRERAI QTRDTSVDAR R
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