Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1697 |
Symbol | |
ID | 1220533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1813529 |
End bp | 1813867 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637238087 |
Product | hypothetical protein |
Protein accession | NP_519818 |
Protein GI | 17546416 |
COG category | [S] Function unknown |
COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.10162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0559982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACG TCATGAACAT CGGCGGCCAC AAGGCCGTCA TCGCCTACGA CCCGGATATC GAAATGTTCC GTGGAGAGTT TGTTGGCCTG AACGGTGGCG CCGATTTCTA CGCCGCCGAT GTACCCGGCC TGCACCGCGA AGGCGAGTTG TCGCTGCACG TGTTTCTGGA AGAGTGCGCA CGGCGTGGCG TTGAACCGCA AAAGCACTTT TCTGGCAAGT TCATGCTGCG AGTGGAGGGC AAGGTGCACG AGGCCGCCAC CATCGCCGCT GCCGCGCAAG GCGTGAGCCT TAACCAGTGG GCAGCCGGCG TGCTGGAGCA AGCCGCCGAG GCGGCTTAA
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Protein sequence | MINVMNIGGH KAVIAYDPDI EMFRGEFVGL NGGADFYAAD VPGLHREGEL SLHVFLEECA RRGVEPQKHF SGKFMLRVEG KVHEAATIAA AAQGVSLNQW AAGVLEQAAE AA
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