Gene RSc1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1697 
Symbol 
ID1220533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1813529 
End bp1813867 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content62% 
IMG OID637238087 
Producthypothetical protein 
Protein accessionNP_519818 
Protein GI17546416 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.10162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0559982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG TCATGAACAT CGGCGGCCAC AAGGCCGTCA TCGCCTACGA CCCGGATATC 
GAAATGTTCC GTGGAGAGTT TGTTGGCCTG AACGGTGGCG CCGATTTCTA CGCCGCCGAT
GTACCCGGCC TGCACCGCGA AGGCGAGTTG TCGCTGCACG TGTTTCTGGA AGAGTGCGCA
CGGCGTGGCG TTGAACCGCA AAAGCACTTT TCTGGCAAGT TCATGCTGCG AGTGGAGGGC
AAGGTGCACG AGGCCGCCAC CATCGCCGCT GCCGCGCAAG GCGTGAGCCT TAACCAGTGG
GCAGCCGGCG TGCTGGAGCA AGCCGCCGAG GCGGCTTAA
 
Protein sequence
MINVMNIGGH KAVIAYDPDI EMFRGEFVGL NGGADFYAAD VPGLHREGEL SLHVFLEECA 
RRGVEPQKHF SGKFMLRVEG KVHEAATIAA AAQGVSLNQW AAGVLEQAAE AA