| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1689 |
|---|
| Symbol | |
|---|
| ID | 1220525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1805664 |
|---|
| End bp | 1806317 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637238079 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519810 |
|---|
| Protein GI | 17546408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.536925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.714106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTAC GTCTCCCTAA CGGCACGACG TTCGAGGTCG CGGCCAGCTA TGGCCCGGCC
AAGGCATTCA CGGCCATTAC CAATGCCAAG CCTGCGAAGG CAGCGAGCGT TGCGCACGGC
TTTGCCAAAG GCACCGTCCT CGAAATTTCC TCCGGCTGGG CACGCCTGGA CGGACGTGTC
GCGCGCGCGG ATGCCGTCAC GGCCGACGCT TTCGCGTTCG AGGGCATCGA CACCACGGAC
ACCGATGTCT ATCCGGTTGG CACGGGTATC GGCTCCGTGC TGCCGGTGCT GACCTGGCAG
CAGATCACCC AGGTGCTGCA GTCGGCGGCA TCGGGCGGCG ACCAGCAGTT CTACAACTAC
TCGTTCCTTG AGGACACGAG CGACGAAAAG CAGATCCCGA CGATCCGCAG CGCGCGCTCG
TACACGCTGA CGATCGCCGA CGACCCGGCC CTCGCCCACT ATGCGCTGCT CGAGGCCGCC
GATGAAGATC GCGAGCCGCG CGCCGTGCGG ATGAAGCTGC CCGGCGGCGC GCCGATCTAC
TTCCGCGCCT ATATCGCGTT CTCCAAGGTG CCGACCACGA CCAAGAACGA AGCTATGGCG
ACCACCGTCA CGCTTTCCCT CACGGGCGAA GTGACCCGTT ACGCAGGAGC CTAA
|
|---|
| Protein sequence | MTVRLPNGTT FEVAASYGPA KAFTAITNAK PAKAASVAHG FAKGTVLEIS SGWARLDGRV
ARADAVTADA FAFEGIDTTD TDVYPVGTGI GSVLPVLTWQ QITQVLQSAA SGGDQQFYNY
SFLEDTSDEK QIPTIRSARS YTLTIADDPA LAHYALLEAA DEDREPRAVR MKLPGGAPIY
FRAYIAFSKV PTTTKNEAMA TTVTLSLTGE VTRYAGA
|
|---|
| |