Gene RSc1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1605 
Symbol 
ID1220438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1725346 
End bp1725927 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID637237992 
Producthypothetical protein 
Protein accessionNP_519726 
Protein GI17546324 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000106096 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.311626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC AGGAACAGAT CGCTGCGGCG CAGAAGGCCA ACCTCGAGAC CTTTTTCGGT 
CTGACCAACA AAGCGTTTGA AGGCGTCGAA AAGCTGGTCG AACTGAACCT GCAAGTCGTC
AAAGCGACCC TGGCCGAGAA CGTCGAACAC AGCAAGAAGG CGCTGTCCGC CAAGGACGCA
CAGGAGCTGC TGGCCGTGCA CACCGCTGCC GTGCAGCCGC TGGCCGAGAA GGTCCTGGCT
TACAACCGTC ACCTGTACGA AATCTTCTCG GATACCCAAA CCGAGTTCGG CAAGGTCGCC
GAGACCCAGA TCGCCGAAGG CAGCCGCAAG CTGCAAGCGC TGATCGACAA TGTCTCGAAG
AACGCGCCGG CTGGCTCCGA GTCCGCCGTG GCGCTGGTGA AGTCGGCTCT GTCGGCTGCC
AACAACGCCT ACGACTCGGT GCAGAAGGCC ACCAAGCAAG CGGTGGAACT GGCAGAAAGC
AACTTCCACG CTGCCGCCAA CGCCGCCAGC AAGGCAACGG CCCAGGCTGC CGCCCAAGCG
CGCGCTGCCA CCAACAAGAA GAGCACGAAC GCCGCGGCCT AA
 
Protein sequence
MLTQEQIAAA QKANLETFFG LTNKAFEGVE KLVELNLQVV KATLAENVEH SKKALSAKDA 
QELLAVHTAA VQPLAEKVLA YNRHLYEIFS DTQTEFGKVA ETQIAEGSRK LQALIDNVSK
NAPAGSESAV ALVKSALSAA NNAYDSVQKA TKQAVELAES NFHAAANAAS KATAQAAAQA
RAATNKKSTN AAA