Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1605 |
Symbol | |
ID | 1220438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1725346 |
End bp | 1725927 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637237992 |
Product | hypothetical protein |
Protein accession | NP_519726 |
Protein GI | 17546324 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01841] phasin family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000106096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.311626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACTC AGGAACAGAT CGCTGCGGCG CAGAAGGCCA ACCTCGAGAC CTTTTTCGGT CTGACCAACA AAGCGTTTGA AGGCGTCGAA AAGCTGGTCG AACTGAACCT GCAAGTCGTC AAAGCGACCC TGGCCGAGAA CGTCGAACAC AGCAAGAAGG CGCTGTCCGC CAAGGACGCA CAGGAGCTGC TGGCCGTGCA CACCGCTGCC GTGCAGCCGC TGGCCGAGAA GGTCCTGGCT TACAACCGTC ACCTGTACGA AATCTTCTCG GATACCCAAA CCGAGTTCGG CAAGGTCGCC GAGACCCAGA TCGCCGAAGG CAGCCGCAAG CTGCAAGCGC TGATCGACAA TGTCTCGAAG AACGCGCCGG CTGGCTCCGA GTCCGCCGTG GCGCTGGTGA AGTCGGCTCT GTCGGCTGCC AACAACGCCT ACGACTCGGT GCAGAAGGCC ACCAAGCAAG CGGTGGAACT GGCAGAAAGC AACTTCCACG CTGCCGCCAA CGCCGCCAGC AAGGCAACGG CCCAGGCTGC CGCCCAAGCG CGCGCTGCCA CCAACAAGAA GAGCACGAAC GCCGCGGCCT AA
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Protein sequence | MLTQEQIAAA QKANLETFFG LTNKAFEGVE KLVELNLQVV KATLAENVEH SKKALSAKDA QELLAVHTAA VQPLAEKVLA YNRHLYEIFS DTQTEFGKVA ETQIAEGSRK LQALIDNVSK NAPAGSESAV ALVKSALSAA NNAYDSVQKA TKQAVELAES NFHAAANAAS KATAQAAAQA RAATNKKSTN AAA
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