| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1594 |
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| Symbol | codA |
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| ID | 1220427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1709193 |
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| End bp | 1710464 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237981 |
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| Product | cytosine deaminase |
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| Protein accession | NP_519715 |
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| Protein GI | 17546313 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG TGATTCGCAA TGCGAGCCTG CCCGACGGGC GCGCCGGTAT CGACATCGGC
ATCGCAGCGG GCCGTATCGA GGCGGTGCAG CAGCGCCTGC CGGCACGCGG CGCGGAGGAG
GTCGATGCCG CCGGCGCACT GGTGTCGCCG CCGTTCGTCG ATGCGCATTT CCACATGGAT
GCGACGCTGT CATACGGGCT GCCGCGCGTG AACCGGTCCG GCACGCTGCT CGAAGGCATC
GCGCTGTGGG GCGAGCTCAA GCCCGCGCTG ACGCAGGAGG CGCTGATCGA GCGTGCGCTG
CGCTACTGCG ACTGGGCGGT CGCGCGCGGC CTGCTGGCGA TCCGCTCGCA CGTGGACGTG
TGCGATGCGC GCCTGCTGGC GGTCGAGGCG CTGCTGCACG TCAAGCGGCA GGTGGCGCCT
TACCTCGACC TGCAGCTCGT GGCCTTCCCG CCGGACGGCG TGCTGCGCAG TCCGGGCGCC
TTCGACAACC TCAGGCGCGC CATCGGCATG GGCGTCGATG TGGTCGGCGG CATTCCGCAT
TTCGAGCGCA CCATGGCCGA CGGCGCGGAA TCGGTGCGGC TGCTGTGCGA GTTCGCCGCC
GAGCGCGGCC TGCGCGTCGA CATGCATTGC GACGAGTCGG ACGATCCGCT GTCGCGCCAT
GTCGAGACGC TCGCGGCGCA GGCGCACCGC CTCGGCCTGC ACGGCCGCGT GGCCGGCTCG
CACCTGACCT CGATGCACTC GATGGACAAC TACTACGTCA GCAAGCTGCT TCCGCTGATG
CGCGAGGCCG GCGTCGCGGC GATCGCCAAT CCGCTGATCA ACATCACGCT GCAGGGCCGC
TCGGACACCT ATCCGAAGCG GCGCGGCATG ACCCGCGTGC CGGAACTGCT GGCCGCCGGC
ATCGACGTCG CCTTCGGCCA TGACTGCGTG ATGGACCCGT GGTACGGCCT GGGCTCGGGC
GACATGCTGG AAGTGGCCCA CATGGGTTTG CACGTGGCCC AGATGACCGG CCAGGCGGCG
ATGCGCCAGT GCTTTGCCGC CGTGACCGAA ACGCCCGCGC GCATCCTCGG CCTGGAAGGC
TACGGCATCG CGCCGGGCTG CCATGCCGAT CTGGTGATGC TCGATGCGCG AGATCCGATC
GAGGCAATCC GCCTGCGCGC GGCGCGCACG CTGGTGATGC GGCGGGGCCG GGTGGTGGCG
CGCACGCCCG CGCCGCATGC CGTGCTGTCG CTGCCGGGGC GAGCACCACG CGTCGATTTT
CGGCTCGCCT GA
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| Protein sequence | MDFVIRNASL PDGRAGIDIG IAAGRIEAVQ QRLPARGAEE VDAAGALVSP PFVDAHFHMD
ATLSYGLPRV NRSGTLLEGI ALWGELKPAL TQEALIERAL RYCDWAVARG LLAIRSHVDV
CDARLLAVEA LLHVKRQVAP YLDLQLVAFP PDGVLRSPGA FDNLRRAIGM GVDVVGGIPH
FERTMADGAE SVRLLCEFAA ERGLRVDMHC DESDDPLSRH VETLAAQAHR LGLHGRVAGS
HLTSMHSMDN YYVSKLLPLM REAGVAAIAN PLINITLQGR SDTYPKRRGM TRVPELLAAG
IDVAFGHDCV MDPWYGLGSG DMLEVAHMGL HVAQMTGQAA MRQCFAAVTE TPARILGLEG
YGIAPGCHAD LVMLDARDPI EAIRLRAART LVMRRGRVVA RTPAPHAVLS LPGRAPRVDF
RLA
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