Gene RSc1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1575 
Symbol 
ID1220406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1689401 
End bp1689796 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content65% 
IMG OID637237960 
Producthypothetical protein 
Protein accessionNP_519696 
Protein GI17546294 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC GATGGATTCC CCCGATTTTC AAGATGAGCA CTGAACTGAA GCGTTACAAC 
GTCGAACATC GCTACTCCGA CGCGGCGGTC TACAACGGCG TGGTCTATGT CGCCGGCCAG
GTGCCGGAAA CCACCCTGGA CGGCGACATT GCCGCGCAGA CCGCCGAGGT GCTCGCCACC
ATCGACCGCG TGCTGGCCGC CAACGGCAGC GACAAGACGC GCATCCTGAT GTGCCAGATC
TTCCTGAAGG ACATCGCCGA GATCGGTGCG ATGAACGCGG TCTGGGACCA GTGGGTCGCG
CCGGGCAACG CGCCGCCGCG CGCCACCGTG GAGGCCGCGC TGGCCAATCC GAAGTACCGC
ATCGAGATCG TCGTGACGGC GGCGCGCAAG GGCTGA
 
Protein sequence
MTTRWIPPIF KMSTELKRYN VEHRYSDAAV YNGVVYVAGQ VPETTLDGDI AAQTAEVLAT 
IDRVLAANGS DKTRILMCQI FLKDIAEIGA MNAVWDQWVA PGNAPPRATV EAALANPKYR
IEIVVTAARK G