Gene RSc1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1559 
Symbolrbn 
ID1220390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1674515 
End bp1675840 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID637237944 
Productputative ribonuclease BN transmembrane protein 
Protein accessionNP_519680 
Protein GI17546278 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.837363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG ATACCCGTGT GCTCCGCCAA TGGAATGTCC CGAAGCTGCG TGCGCTGCAG 
CGCTATGCAC TGCGGCGCGC GGGCGAGGAC AGCCTGCCGC AGGTGGCGGG CAGCCTGACC
TTCACCACGG TGCTGTCGCT GGTGCCGATC CTGACGGTGG CGTTCGCGCT GTTCACCGCG
TTCCCGATGT TCCAGAGCTT TCGGGCGGCC ATCGAGGGCT ACCTGTTCAG CAACCTCGTA
CCGGGCAACA TCAGCCGGCC GATCCTGACG TATCTGAACC AGTTCTCGCA CAACGCCAAG
GGGCTGACGG CCGCCGGCCT GGTCGGCCTC GTCGTCACGT CGGTGATGAC CATGCTCACG
GTCGAGAACG CCCTCAACGC CATCTGGCGC GTGCGCCAGC GCCGGCCGCT GGCGCAGCGC
GTGCTGGTGT TCTGGGCGCT GGTCAGCTTC GGGCCGGTGC TGATCGGCGC GAGCCTGTCG
GTCAGCTCGT ACCTGGTGTC GGTCTCGGCG GGCTACGTCG CCAAGCTGCC GTATGGGCTG
GGCGTGGTGG TGGGGCTGGT GCCGATCCTG CTGTCGGCCA TCGCGTTCGC CATGCTGTAT
GTGTTCGTGC CGAACACCCT CGTTGCGTGG CGCGATGCGT TCCTGGCGGG GCTGGTTGCC
GCCGTGGCCT TCGAAATCGC CAAGCGCGGC TTCGGCTATT ACGTGGCGCG CTTTCCCACC
TACACGGCGG TCTACGGGAC CTTTGCCGCG CTGCCGATCT TCCTGCTGTG GATCTACGTC
AGCTGGCTGG TGACGCTGCT GGGCGCGACC ATCGCCGCCA CCTTACCGAT CATCCGCCAG
GGCTATTGGC AGCGCCGCGC CTTCCCGGGC AGTGAGTTTT TCGATGCGCT CGGCATCCTG
CTGCTGCTGC ACCGCGCGCG CGACCACGCG CCACGCACGC TCGGCGAACT GGACATCGGC
CGGCGCCTGC AGCTGGAGGC GGATTACGTG GCCGACCTGC TGATCCAACT GAAGACGCTG
CATCTGGTCG GCAAGCTGCA GCAGGATCGC GGGCAGGCGC ATTGGGCGCT GCTGTGCGAC
GCGCATACCA CCACGCTGCG CCCGCTTTAC GAGAAGCTGG TGCTGAGCTT GCCACGGCTG
TCGCGCACGG CGTTCGCGCA TCAACTGGGC GATACGCGCG TACTCGAGGC CCAGCTCCAC
AACCCGGCGC TGGATTGCAC GCTGGAAGCC GTGTTCGCGT CCGGTGAGCC CGGCGTGGTG
AAGGCCGCTG CCGAAGCCGC GGCCGCGCCG GCCGCCGCAA CGCTGGCGGC GTCCGCCCGC
GCCTGA
 
Protein sequence
MQFDTRVLRQ WNVPKLRALQ RYALRRAGED SLPQVAGSLT FTTVLSLVPI LTVAFALFTA 
FPMFQSFRAA IEGYLFSNLV PGNISRPILT YLNQFSHNAK GLTAAGLVGL VVTSVMTMLT
VENALNAIWR VRQRRPLAQR VLVFWALVSF GPVLIGASLS VSSYLVSVSA GYVAKLPYGL
GVVVGLVPIL LSAIAFAMLY VFVPNTLVAW RDAFLAGLVA AVAFEIAKRG FGYYVARFPT
YTAVYGTFAA LPIFLLWIYV SWLVTLLGAT IAATLPIIRQ GYWQRRAFPG SEFFDALGIL
LLLHRARDHA PRTLGELDIG RRLQLEADYV ADLLIQLKTL HLVGKLQQDR GQAHWALLCD
AHTTTLRPLY EKLVLSLPRL SRTAFAHQLG DTRVLEAQLH NPALDCTLEA VFASGEPGVV
KAAAEAAAAP AAATLAASAR A