Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1559 |
Symbol | rbn |
ID | 1220390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1674515 |
End bp | 1675840 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237944 |
Product | putative ribonuclease BN transmembrane protein |
Protein accession | NP_519680 |
Protein GI | 17546278 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.837363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCG ATACCCGTGT GCTCCGCCAA TGGAATGTCC CGAAGCTGCG TGCGCTGCAG CGCTATGCAC TGCGGCGCGC GGGCGAGGAC AGCCTGCCGC AGGTGGCGGG CAGCCTGACC TTCACCACGG TGCTGTCGCT GGTGCCGATC CTGACGGTGG CGTTCGCGCT GTTCACCGCG TTCCCGATGT TCCAGAGCTT TCGGGCGGCC ATCGAGGGCT ACCTGTTCAG CAACCTCGTA CCGGGCAACA TCAGCCGGCC GATCCTGACG TATCTGAACC AGTTCTCGCA CAACGCCAAG GGGCTGACGG CCGCCGGCCT GGTCGGCCTC GTCGTCACGT CGGTGATGAC CATGCTCACG GTCGAGAACG CCCTCAACGC CATCTGGCGC GTGCGCCAGC GCCGGCCGCT GGCGCAGCGC GTGCTGGTGT TCTGGGCGCT GGTCAGCTTC GGGCCGGTGC TGATCGGCGC GAGCCTGTCG GTCAGCTCGT ACCTGGTGTC GGTCTCGGCG GGCTACGTCG CCAAGCTGCC GTATGGGCTG GGCGTGGTGG TGGGGCTGGT GCCGATCCTG CTGTCGGCCA TCGCGTTCGC CATGCTGTAT GTGTTCGTGC CGAACACCCT CGTTGCGTGG CGCGATGCGT TCCTGGCGGG GCTGGTTGCC GCCGTGGCCT TCGAAATCGC CAAGCGCGGC TTCGGCTATT ACGTGGCGCG CTTTCCCACC TACACGGCGG TCTACGGGAC CTTTGCCGCG CTGCCGATCT TCCTGCTGTG GATCTACGTC AGCTGGCTGG TGACGCTGCT GGGCGCGACC ATCGCCGCCA CCTTACCGAT CATCCGCCAG GGCTATTGGC AGCGCCGCGC CTTCCCGGGC AGTGAGTTTT TCGATGCGCT CGGCATCCTG CTGCTGCTGC ACCGCGCGCG CGACCACGCG CCACGCACGC TCGGCGAACT GGACATCGGC CGGCGCCTGC AGCTGGAGGC GGATTACGTG GCCGACCTGC TGATCCAACT GAAGACGCTG CATCTGGTCG GCAAGCTGCA GCAGGATCGC GGGCAGGCGC ATTGGGCGCT GCTGTGCGAC GCGCATACCA CCACGCTGCG CCCGCTTTAC GAGAAGCTGG TGCTGAGCTT GCCACGGCTG TCGCGCACGG CGTTCGCGCA TCAACTGGGC GATACGCGCG TACTCGAGGC CCAGCTCCAC AACCCGGCGC TGGATTGCAC GCTGGAAGCC GTGTTCGCGT CCGGTGAGCC CGGCGTGGTG AAGGCCGCTG CCGAAGCCGC GGCCGCGCCG GCCGCCGCAA CGCTGGCGGC GTCCGCCCGC GCCTGA
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Protein sequence | MQFDTRVLRQ WNVPKLRALQ RYALRRAGED SLPQVAGSLT FTTVLSLVPI LTVAFALFTA FPMFQSFRAA IEGYLFSNLV PGNISRPILT YLNQFSHNAK GLTAAGLVGL VVTSVMTMLT VENALNAIWR VRQRRPLAQR VLVFWALVSF GPVLIGASLS VSSYLVSVSA GYVAKLPYGL GVVVGLVPIL LSAIAFAMLY VFVPNTLVAW RDAFLAGLVA AVAFEIAKRG FGYYVARFPT YTAVYGTFAA LPIFLLWIYV SWLVTLLGAT IAATLPIIRQ GYWQRRAFPG SEFFDALGIL LLLHRARDHA PRTLGELDIG RRLQLEADYV ADLLIQLKTL HLVGKLQQDR GQAHWALLCD AHTTTLRPLY EKLVLSLPRL SRTAFAHQLG DTRVLEAQLH NPALDCTLEA VFASGEPGVV KAAAEAAAAP AAATLAASAR A
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