| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1541 |
|---|
| Symbol | |
|---|
| ID | 1220371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 1647485 |
|---|
| End bp | 1648306 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637237925 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519662 |
|---|
| Protein GI | 17546260 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0528379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTCT ACGAAGCCGG CTGGCTCGCC AGCGCGGGGC TGGGCTCCGT GGTCGGACTG
ATCCTCGCGC TGACGGGCGC CGGGGGCGCC ATCGTGGCGG TGCCGCTGCT GATCTTCGGC
CTGCACCTGT CGGTCTCGCA GGCGGCGCCG GTGGCGCTGC TGGCTGTCGG CCTGTCCGCC
GGGCTGGGTT CGGTGCTGGG GCTGCGCGAG GGCAAGGTCC GCTACAAGGC CGCCGCGCTG
ATGGCGCTGT GCGGCGTGGC GCTGTCGCCG CTGGGCGTCT GGGCCGCGCA TCGCGTGCCG
AATACGCCGT TGACCGTGCT GTTTGCCATG GTGCTCGCCC ATGTGGCAAT CCGCATGTTC
CTGCAGGCGC GCGCAACGGC CCCTGCCGCG CCATCGCCAC GCCATGCCGC CCCGCCCTGC
CACCTGGACA CCGTCCGCGG CAAGCTGATC TGGACCCTGC CGTGCGCGCG CACGCTGGCA
TCCTGGGGCG CGGCGGCCGG CCTCCTGTCC GGGCTGCTCG GCGTCGGCGG CGGCTTCGTC
ATCGTGCCGG CATTGCGCCG CGCAACCGAC CTGCCGATGC AAACCATCGT GGCCACATCC
CTCGCGGTGA TCGCCCTCGT CTCGGTCGGC GGCGTGCTCG CCTCGGCCAT CGGCGGGCAT
GTTGACTGGC ACATCGCCCT GCCGTTCGCC GCCGGCGCAT TGGCGGGCAT GCTGACCGGG
CGCGGCTTCT CGCGCCATCT GGCGGGGCCG GCGCTGCAGC AGGGTTTCGC GGCGTTTGCC
GGCGTGGTGG CGATCGGACT GGTTGTGCGG GCGCTGGCCT GA
|
|---|
| Protein sequence | MPLYEAGWLA SAGLGSVVGL ILALTGAGGA IVAVPLLIFG LHLSVSQAAP VALLAVGLSA
GLGSVLGLRE GKVRYKAAAL MALCGVALSP LGVWAAHRVP NTPLTVLFAM VLAHVAIRMF
LQARATAPAA PSPRHAAPPC HLDTVRGKLI WTLPCARTLA SWGAAAGLLS GLLGVGGGFV
IVPALRRATD LPMQTIVATS LAVIALVSVG GVLASAIGGH VDWHIALPFA AGALAGMLTG
RGFSRHLAGP ALQQGFAAFA GVVAIGLVVR ALA
|
|---|
| |