| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1540 |
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| Symbol | |
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| ID | 1220370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1646071 |
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| End bp | 1647285 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637237924 |
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| Product | transferase transmembrane protein |
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| Protein accession | NP_519661 |
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| Protein GI | 17546259 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1835] Predicted acyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0294492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGTTAC CATGCCGGCT TCACTGTGAT TGTGGGGAAA ATGTGGCCCA TGTAAGTCAA
GGGTTCGTCG GAAGACTGGA GTCGCTAAGG GGGATCGCCG CCCTGGGTGT CGCCATCTTC
CACGCGCTGA TCTGGATCGC CTTCGGCGCC GAGCGGGCAC TCTTCACGCA GACAGTCGAA
AGCGTCCACG GTGTCCAGGT CACGATTGCC CGGACCATTC TTTCGGCATT TTGCGGCCCG
GCCGCCGTGA TCGTGTTTTT TGTCCTGAGC GGCTTTGTCC TAGCCAGATC TTTGCGCAAA
GAACCGCTCG GGGCTGCGAT GTACATCGGC TATTGCCTGA AGCGGGTGAT GCGGATTCTG
CCCGCGCTCG CGTTGTCGAT CGCCATCGTG CTTGTGTATT TGGCCGTCTT CTATCCCGGA
TACCAAGCCT TTCCGGCAGC CTCGATCTGG TTCAACTGGT GGTACAAGGA GCCGATCACA
GTCGTTGACG TCGTCAAGAA CCTCGCGATG GTGTCGTCAT CCCTCAACTC GAATGCCTGG
ACGCTGCGCA TCGAAATGCT GGCTTCGTTT GCGTTGCCGT TTGTCGTGGC GATCATGGGG
CGCAGCGGAA TGGTGCGTTC GCTGATCGCC GTCGCCGCAT GCTTTGCATG GGCCGCCTAT
ACAGACAACC CGGCAAGCGC GCCTGGCGAG TTCGCCCATT ACGCCTATAT GTTCGTGCTG
GGCGTAGCCG TCGAGAAACA CATCGGCCAG GTTGCAAGGA TTCCAACGTG GCTGTCAGGT
CTGCTGGTGA TCGCCAGCCT GTCCGCAATG GTGGCCGTCA ATGCCCTCTG GCCGCTCGCC
CACTTCCTAT ATTGCGATGC GGCCATCGCC GTAAGCGCCG CGCTCCTCAT CCTGGTGATC
GTCGTCGACG GGAATGCGAA GTTCCTTGCG ATCATGGATA CCCGCGCCGT TCGCTTTTTG
GGCCGTGTTT CGTACAGCTT CTATATCCTG CATTTCATCT TCCTGTACGG CACGGCAAAT
CTTGCGTTGC GACTGTTTCC AGAAGGCGTG CTGGTAAGGT ATCCGCTGAT CGCATCGGCG
CTTGTGGCAA TTGCTTCAAT TGCCATGACC CTGCCGTTCG CATCCCTCTC GTATCGTTTT
GTAGAGCGCC CAATGACAGC GGTCGGAAAA CGGATCGCCG AGATGCAATG GTTGCGCATG
AGGACATCGC CGTAG
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| Protein sequence | MALPCRLHCD CGENVAHVSQ GFVGRLESLR GIAALGVAIF HALIWIAFGA ERALFTQTVE
SVHGVQVTIA RTILSAFCGP AAVIVFFVLS GFVLARSLRK EPLGAAMYIG YCLKRVMRIL
PALALSIAIV LVYLAVFYPG YQAFPAASIW FNWWYKEPIT VVDVVKNLAM VSSSLNSNAW
TLRIEMLASF ALPFVVAIMG RSGMVRSLIA VAACFAWAAY TDNPASAPGE FAHYAYMFVL
GVAVEKHIGQ VARIPTWLSG LLVIASLSAM VAVNALWPLA HFLYCDAAIA VSAALLILVI
VVDGNAKFLA IMDTRAVRFL GRVSYSFYIL HFIFLYGTAN LALRLFPEGV LVRYPLIASA
LVAIASIAMT LPFASLSYRF VERPMTAVGK RIAEMQWLRM RTSP
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