| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1478 |
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| Symbol | bioF |
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| ID | 1220307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1585318 |
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| End bp | 1586568 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637237861 |
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| Product | 8-amino-7-oxononanoate synthase |
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| Protein accession | NP_519599 |
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| Protein GI | 17546197 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0815886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.237917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGC TTGACGACCT GCGGGCCGGC CTGGACGCCA TCGACGCCGC GCACCTGCGT
CGCGTGCGCC GCACCGCCTA CAGCCCCACC GACCGCAGCC AGCGCATCGA CGTGCCGGGC
GGCGAGCCGC GCGAGATCCT CGGCTTCTGC GGCAACGACT ACCTCGGCCT GGCCGCGCAT
CCGGCGCTGA TGCAGGCGGT GGGCGAGGGC GCCCGCCGGT ACGGCTTCGG CAGCGGCGCC
TCGCACCTCG TCAGCGGCCA CTCGGTGGCC CATGCGAGGT TGGAAGCGCG CATGGCGGCC
CTGCAGGCGC CGCATATTCC CGATGCCGAT GCGCTGTGCT TCTGTACCGG CTACATGGCC
AACATGGCGG TGGTCAGCGC GATGGCGCAG GCCGGCGGCA TCCAGCCGGC GCAGGACTGC
ACGGTCTTCT CCGACGCGCT GAACCACGCC TCGCTGATCG ACGGTGCCCG GCTGTCGCGC
GCGGCGGTCA AGGTCTATCC GCACGTCGAC CTGGCCGCGC TGGAGGCGCA GCTGGCCGCC
TGCGGCAGCC GCAACAAGCT GATCGTCACC GACGGCGTGT TCAGCATGGA CGGCGACATC
GCGCCGCTGC CCGAACTGCT GGCGCTGGCA GAGCGCTTCG ATGCCTGGCT GATCGTCGAC
GACGCGCACG GCCTGGGCGT GCTCGGCGCG GACGGGGTGG GCGTGCTGTC GCACTTCGGG
CTGCGCTCCG AGCGCCTGAT CTATATCGGC ACCTTCGGCA AGGCGGCCGG CGGCGCCGGG
GCCTGCGTGG TGGCGCACCG GATGGCGGTC GACTGGCTGG TGCAGCGGGC CCGCACATAT
ATCTTCACGA CCGCCACGCC GCCCGCCGTC GCCTGCGGGG TGGAGGCGGC GCTGGACCTG
ATTGCGGGGG AGGAGGGCGC TGCGCGCCGG GCCCGGCTGG CCGGCCACAT CGCCCGCTGG
AGCGATCACG CGCAGCGGCT GGCGGCACGG TTCGGCTGGC AGTGGATGCC GTCGCCCACC
GCGATCCAGC CGCTGGTGAT CGGCGAGAAC GCGCCGGCGC TGGCGCTGGC GGCGGCGCTG
GAGCGCGAGG GCATCCGCGT CGCCGCGATC CGCCCGCCGA CCGTGCCGGC CGGGACCGCG
CGGCTGCGCA TCACCCTGTC CGCCGCGCAC ACCGAGGACG ACATCGAGCG GCTGGCCCGC
GCGCTGGAGG CGGCCGGCCA ATCGCAGCAA TCCGCCGCCC GCGCTGCCTG A
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| Protein sequence | MRLLDDLRAG LDAIDAAHLR RVRRTAYSPT DRSQRIDVPG GEPREILGFC GNDYLGLAAH
PALMQAVGEG ARRYGFGSGA SHLVSGHSVA HARLEARMAA LQAPHIPDAD ALCFCTGYMA
NMAVVSAMAQ AGGIQPAQDC TVFSDALNHA SLIDGARLSR AAVKVYPHVD LAALEAQLAA
CGSRNKLIVT DGVFSMDGDI APLPELLALA ERFDAWLIVD DAHGLGVLGA DGVGVLSHFG
LRSERLIYIG TFGKAAGGAG ACVVAHRMAV DWLVQRARTY IFTTATPPAV ACGVEAALDL
IAGEEGAARR ARLAGHIARW SDHAQRLAAR FGWQWMPSPT AIQPLVIGEN APALALAAAL
EREGIRVAAI RPPTVPAGTA RLRITLSAAH TEDDIERLAR ALEAAGQSQQ SAARAA
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