| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1461 |
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| Symbol | |
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| ID | 1220290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1563766 |
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| End bp | 1564488 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237844 |
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| Product | putative transporter transmembrane protein |
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| Protein accession | NP_519582 |
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| Protein GI | 17546180 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1285] Uncharacterized membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.650566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC AAGCCGTCGC CCAATTCAAC GCCGCCACCC TGCTGGATTC TTTTATCAGC
CTGGCGGCCG CCTTCGGGCT CGGCTCGCTG ATCGGCTTTG AGCGGCAGGT GCGCCAGCGC
ACGGCCGGCC TGCGCACCAA CGCGCTGGTG GCGGTGTCGG CATCGGCCTT CGTCGACATG
GCCGCGCAGA TCGGCTCGCC CGCCGATACC ACCCGCGTGA TCGCCTACGT GGTCTCGGGC
GTGGGCTTTC TGGGCGCCGG CACGATCATG AAGGAAGGGC TGAACGTGCG CGGCCTGAAC
ACCGCCGCCA CGCTGTGGGG CTCGGCCGCC GTGGGCGCGG CGGCGGGCTC GGACCTGCTC
GGCCAGGCCC TGATGATCTC GCTGTTCGTG CTGGCCTCGA ACATCCTGCT GCGGCCCGTG
GTCGACCGCA TCAACCGCAC GCCGCTGGAC AACCAGGCCA GCGAAGTCAC CTACACCGTG
CACGCCATCT CCACGCGCGA GCGCCAGAAA GACGCGCTCG CCGACCTGGA GCGCCTGCTG
GAAGAGGCCA GCTACCCGAT CAGCGATCTC TCGGTCGCGC CGTTCGGCGA GGACCACGTG
GAGCTGGAGG CCATGCTGAT GTCGACCGCC GTCAATGCCG GCGAGCTGGA CCGGATCGTC
GGCGCGCTGG CCGCGCAGCC GCATATCGCG CAGGCGTACT GGAACCCCAG CACCACCGAG
TAA
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| Protein sequence | MTLQAVAQFN AATLLDSFIS LAAAFGLGSL IGFERQVRQR TAGLRTNALV AVSASAFVDM
AAQIGSPADT TRVIAYVVSG VGFLGAGTIM KEGLNVRGLN TAATLWGSAA VGAAAGSDLL
GQALMISLFV LASNILLRPV VDRINRTPLD NQASEVTYTV HAISTRERQK DALADLERLL
EEASYPISDL SVAPFGEDHV ELEAMLMSTA VNAGELDRIV GALAAQPHIA QAYWNPSTTE
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