| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1423 |
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| Symbol | |
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| ID | 1220247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1523975 |
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| End bp | 1524901 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237801 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_519544 |
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| Protein GI | 17546142 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.169777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00134863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCGAGC TGGGGACTCT CGCGCTCATC GTCCTGTTTG CCGCCATCGT ACTGATCGCG
CAGAGCATCA AGATCGTGCC GCAGCAGCAC GCGTGGATCC TGGAGCGGCT GGGCAAGTAC
CACGCGACGC TGTCGCCGGG GCTCAATATC GTGCTGCCGT TCGTCGACCG GGTGGCTTAC
AAGCACGTGC TCAAGGAGAT CCCGCTGGAT GTGCCGAGCC AGATCTGCAT CACCAAGGAC
AACACGCAGC TGCAGGTCGA CGGCATCCTG TACTTCCAGG TGACCGACCC GATGCGCGCT
TCGTACGGCT CGAGCAACTT CGTCATCGCC ATCACGCAGC TCGCGCAGAC CACGCTGCGC
TCGGTGGTCG GCAAGCTGGA GCTGGATAAG ACCTTCGAGG AGCGCGAGTT CATCAACCAC
AGCGTGGTCA ATGCGCTGGA CGAGGCGGCC TCCAACTGGG GCGTGAAGGT GCTGCGCTAT
GAGATCAAGG ACCTGACGCC GCCCAAGGAG ATCCTGCACG CGATGCAGGC GCAGATCACC
GCCGAGCGCG AGAAGCGCGC CCTGATCGCG GCATCTGAAG GCAAGCGCCA GGAGCAGATC
AACCTGGCCG CCGGCGCCCG CGAGGCCGCG ATCCAGAAAT CCGAAGGGGA GAAGCAGGCC
GCCATCAACC GGGCCCAGGG CGAAGCGGCA GCCATCCTGG CGGTGGCCGA GGCCAACGCG
CAGGCGATCC AGAAGGTCGG TCACGCCATC CGCACCGAAG GCGGCATCGA CGCGGTCAAC
CTGAAGGTGG CCGAGGAATA CGTGTCGGCG TTCGGCAATC TGGCCAAGCA GGGCAACACG
CTGATCGTGC CCGGCAACCT GGGCGACCTG AGCACGATGA TCGCGTCGGC GCTGCAGATC
GTGAAGCAGC AGCGGCCGAA CGCGTAG
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| Protein sequence | MFELGTLALI VLFAAIVLIA QSIKIVPQQH AWILERLGKY HATLSPGLNI VLPFVDRVAY
KHVLKEIPLD VPSQICITKD NTQLQVDGIL YFQVTDPMRA SYGSSNFVIA ITQLAQTTLR
SVVGKLELDK TFEEREFINH SVVNALDEAA SNWGVKVLRY EIKDLTPPKE ILHAMQAQIT
AEREKRALIA ASEGKRQEQI NLAAGAREAA IQKSEGEKQA AINRAQGEAA AILAVAEANA
QAIQKVGHAI RTEGGIDAVN LKVAEEYVSA FGNLAKQGNT LIVPGNLGDL STMIASALQI
VKQQRPNA
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