| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1383 |
|---|
| Symbol | |
|---|
| ID | 1220207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1474954 |
|---|
| End bp | 1475979 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637237761 |
|---|
| Product | D-aminopeptidase protein |
|---|
| Protein accession | NP_519504 |
|---|
| Protein GI | 17546102 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.306178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACA GCATGGCCCA CATCGGCGTG CTGCCGGCTG GCGCGCGCAA CAGCATCACG
GACGTGGCCG GCATCACGGT CGGGCACGCC ACGCTCGCCG GCGGCAGCAT CCAGACTGGC
GTGACGGTGG TGCGCCCGCA TGCCGGCGAT CCGTTCCTCG ACAAGGTGCC CGCCGCGTGC
GCGGTGCTCA ACGGCTTCGG CAAGAGCGTC GGCCTGCTGC AGGTGGAGGA GCTCGGCGTG
CTGGAGACGC CCATCGCGCT GACCAACACC TTCGCCGTGG GCGACGTGGC GCGGGCACAG
GTCCAGCAGG CGGTCGAGGC GCATCCGCAG ATCGGGCGCG CCTGGCCCAC CGTCAACCCG
CTCGTCTTCG AATGCAACGA CGGCTACCTG AACGACCTGC AGTCCTTCGC CGTGCGCGAC
CTGCACTACT ACGCCGCGTG CCTGGCGGCG GGCGGCGCGT TCGCGCAGGG CGCGGTGGGC
GCGGGCCGGG GCATGTCGGC GTTCGGCGTG AAGGGGGGGC TCGGCTCGGC CTCGCGCGTG
GTCGCGCTGG AGGACGGCAC GCGGCGCACG GTCGGCGCGC TGGTGCTGGC CAACTTCGGC
GTCACGGCGA ACCTGACGCT GGCCGGCCGC CGCATCGGCG CCGACATCGC CCGCGTGCTG
GCCGAGGACG CGCCGGGGCC GGAGAAGGGC TCCATCATCA TGCTGCTCGC CACCGATGCG
CCGCTCGACG CGCGCCAGCT GCGGCGCGTG GCGCTGCGCG CGGGCGCCGG CCTGGCGCGC
ACCGGCTCGG TGTTCGGCCA CGGCAGCGGC GACATCGCGC TGGCGTTCTC CACGGCCTAC
ACCGTGCCCC ATCTCGGCGC GCGCCCGATG CCGGCCGTCG CCATGACGCA CGAGACCCAT
CTCGACCCGC TGTTCCAGGC CGCCGCCGAC AGCGTCGAGC AGGCCATCGT GCATGCCCTT
TTCTACGCCG AGACCGTCAC CGGCCGTGAC GGCCACACGC GGCGTGCCCT GACCGAACTG
TTGTAG
|
|---|
| Protein sequence | MTHSMAHIGV LPAGARNSIT DVAGITVGHA TLAGGSIQTG VTVVRPHAGD PFLDKVPAAC
AVLNGFGKSV GLLQVEELGV LETPIALTNT FAVGDVARAQ VQQAVEAHPQ IGRAWPTVNP
LVFECNDGYL NDLQSFAVRD LHYYAACLAA GGAFAQGAVG AGRGMSAFGV KGGLGSASRV
VALEDGTRRT VGALVLANFG VTANLTLAGR RIGADIARVL AEDAPGPEKG SIIMLLATDA
PLDARQLRRV ALRAGAGLAR TGSVFGHGSG DIALAFSTAY TVPHLGARPM PAVAMTHETH
LDPLFQAAAD SVEQAIVHAL FYAETVTGRD GHTRRALTEL L
|
|---|
| |