| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1362 |
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| Symbol | |
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| ID | 1220186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1451325 |
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| End bp | 1452026 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237740 |
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| Product | putative 2-haloalkanoic acid dehalogenase protein |
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| Protein accession | NP_519483 |
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| Protein GI | 17546081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGA TTCGCGCGGT GGTGTTCGAT GCCTACGGCA CGCTGTTCGA CGTGTATTCG
GTGGCCGCGC GCGCTGAGCA GCTGTTTCCC GGCAAGGGCG AGGCGCTGTC GGTGCTGTGG
CGCGACCGGC AGATCGACTA CACCCGCATC CGTTCGCTGG CGGGACCCTC GGGCGAGCAC
TACAAACCGT TCTGGGACGT CACCGTCGAC GCGCTGCGCT ATGCGTGCGC GCGGCTGAAC
CTGCCGCTCG GCAACCACGC CGAGGCCACG CTGATGCGCG AATACGCGTG CCTGTCGGCG
TTTCCGGAGA ACGTGCCGGT GCTCCGGCAG TTGCGTGAGA TGGGGCTGCC GCTGGGCATC
CTGTCCAACG GCAATCCGCA GATGCTGGAG ATCGCCGTCA AGAGCGCGGG CATGTCGGGG
CTGTTCGACC ACGTGCTGTC GGTGGATGCG GTCAGGCTGT ACAAGACCGC GCCGGCCGCA
TACGCGCTGG CGCCGCGGGC GTTCGGCGTG CCGGCCGCGC AGATCCTGTT CGTGTCGTCC
AACGGCTGGG ATGCCTGCGG CGCGACGTGG CACGGCTTCA CGACGTTCTG GATCAACCGC
CTGGGGCATC CGCCCGAGGC GCTGGATGTG GCGCCCGCCG CGGCCGGCCA CGACATGCGG
GACCTGCTGC AGTTCGTGCA GGCCCGGCAA TCCATGCGGT AG
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| Protein sequence | MTSIRAVVFD AYGTLFDVYS VAARAEQLFP GKGEALSVLW RDRQIDYTRI RSLAGPSGEH
YKPFWDVTVD ALRYACARLN LPLGNHAEAT LMREYACLSA FPENVPVLRQ LREMGLPLGI
LSNGNPQMLE IAVKSAGMSG LFDHVLSVDA VRLYKTAPAA YALAPRAFGV PAAQILFVSS
NGWDACGATW HGFTTFWINR LGHPPEALDV APAAAGHDMR DLLQFVQARQ SMR
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