Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1355 |
Symbol | |
ID | 1220179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1442693 |
End bp | 1443106 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237733 |
Product | hypothetical protein |
Protein accession | NP_519476 |
Protein GI | 17546074 |
COG category | [S] Function unknown |
COG ID | [COG2105] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.425632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGG CCATCCACGT CTTCGCCTAC GGCACGCTGC GCGCGGGCGA GGCCAACGAC CTGCGCGTCG CCGCGTCCCG GCGCGGTATC GCCGAGCCGA AGCTGATCGG CCACGCGACG CTGCACGGTC GGCTGTACGA CTTCGGCGCG TATCCCGGCC TGGTGCCGGA CCCGACCGGC ACCGCCGTGC GCGGCGACGT CTACCGCATC GACCCCGGGC TTGTGCCGGT GCTCGACACG ATCGAAGCGG TCTACCCTGG CGGCGGCGCG CTGTTCCTGC GCGAGACCCA CACCGTGATG CTCGGCAGCG AGCCGCTCGA CTGCATCGTC TATCCGGTCA GTGCCGGGCA GGTGGCGGGG CGGCACGTCA TTACCGGTGG GGATTGGGTG GCGTACCGGC TGGCGCGGGG GTGA
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Protein sequence | MTEAIHVFAY GTLRAGEAND LRVAASRRGI AEPKLIGHAT LHGRLYDFGA YPGLVPDPTG TAVRGDVYRI DPGLVPVLDT IEAVYPGGGA LFLRETHTVM LGSEPLDCIV YPVSAGQVAG RHVITGGDWV AYRLARG
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