Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1344 |
Symbol | |
ID | 1220168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1430770 |
End bp | 1431438 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637237722 |
Product | hypothetical protein |
Protein accession | NP_519465 |
Protein GI | 17546063 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.900855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA CCGCAGCGCA AACCGCGATC GCCGCGCACG GCCGGCACTG GCCGGCGGGC GTTGCCATGC TGACCGTGCC GGGGTTGTAC GGCAGCGGTC CGGGGCATTG GCAGAGCCGC TGGGAAGAGC GCTTTCCCGA CTGGCGCCGC GTGGAGCAGG ACGACTGGTC CACGCCGGAC CTCGCGCGCT GGTCGGCCCG GGTGGGGCAG GCTGCGCGCG CGGCCCAGGC GGAGCGGCCG CGCCATGCCC CGCGCGCCGT GCTGGTGGCG CACAGCTTCG GCTGCCTGGC GTCGCTGCAC TGGGCGGTGC AGGCGCGCGA CGCGGTGGCG GGCGTGCTGC TGGTCGCGCC GGCCGACCCG GACAAGTTCG GCGTGGCGGA CCAGCTGCCG CAGCGCGCGC TGCCGTTTCC CGCCGTGCTG GTCGCCAGCC GCAACGACCC CTGGCTGGGC TACGGCCAGG CCTTGGAGTG GGGCGCGCGC TGGGGCGCGG AGGTGGTCGA CGCGGGCCAT GCCGGCCACA TCAACGCGGA TTCCGGCCTG GGGGAGTGGG AGCCCGGTCT TGCGCTGCTC GATCGCCTGG TCAGTCGTGC CTGTGCGCCG GAGGCCGCTC GCGACGGTGC CGACTGGCAG GCCCAGTGGG ATGTCCTGCC GAGCGCGCCA TATATCTAA
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Protein sequence | MTRTAAQTAI AAHGRHWPAG VAMLTVPGLY GSGPGHWQSR WEERFPDWRR VEQDDWSTPD LARWSARVGQ AARAAQAERP RHAPRAVLVA HSFGCLASLH WAVQARDAVA GVLLVAPADP DKFGVADQLP QRALPFPAVL VASRNDPWLG YGQALEWGAR WGAEVVDAGH AGHINADSGL GEWEPGLALL DRLVSRACAP EAARDGADWQ AQWDVLPSAP YI
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