Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1295 |
Symbol | |
ID | 1220118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1380776 |
End bp | 1381219 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237672 |
Product | putative transcription regulator protein |
Protein accession | NP_519416 |
Protein GI | 17546014 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.260048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGAAA GCGTGGGCTA CCTCCTCGGG CGCGCCAAGA CGGCGCTGTC CATGGCGATC GAACAGGAAG TCACGCTGAT GGACGTGACG CACTCCCAGG CCAGTTGCCT GATGCTGCTC GCCAACGGCC GCTGCCAGAC CGCCACGGAC CTCGGCCGGG AACTGAACAC CGACATCGGC TCGCTCACCC GCATGCTGAG CCGCATGGAG AAGCGCGGCC TGATCGAGCG CATGCGCAGC GAATCCGACC GGCGCGTCGT CCACCTGGCG CTGACCGACG CCGGCCGCAC GCTGGCCGAG CGCATGCCGG CCATCTATAC GCAGGTGCTC AACCGCTTCT TTGCCGGCTT CACGCAGGCC GAGGTGAAGA CCCTGCGCGG CCTCCTGCGG CGCGCGCTCG ACAACGGCAC CGACGGCGCG CGGATGCGCC CCTCCGGTGC CTGA
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Protein sequence | MCESVGYLLG RAKTALSMAI EQEVTLMDVT HSQASCLMLL ANGRCQTATD LGRELNTDIG SLTRMLSRME KRGLIERMRS ESDRRVVHLA LTDAGRTLAE RMPAIYTQVL NRFFAGFTQA EVKTLRGLLR RALDNGTDGA RMRPSGA
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