Gene RSc1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1295 
Symbol 
ID1220118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1380776 
End bp1381219 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID637237672 
Productputative transcription regulator protein 
Protein accessionNP_519416 
Protein GI17546014 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.260048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAAA GCGTGGGCTA CCTCCTCGGG CGCGCCAAGA CGGCGCTGTC CATGGCGATC 
GAACAGGAAG TCACGCTGAT GGACGTGACG CACTCCCAGG CCAGTTGCCT GATGCTGCTC
GCCAACGGCC GCTGCCAGAC CGCCACGGAC CTCGGCCGGG AACTGAACAC CGACATCGGC
TCGCTCACCC GCATGCTGAG CCGCATGGAG AAGCGCGGCC TGATCGAGCG CATGCGCAGC
GAATCCGACC GGCGCGTCGT CCACCTGGCG CTGACCGACG CCGGCCGCAC GCTGGCCGAG
CGCATGCCGG CCATCTATAC GCAGGTGCTC AACCGCTTCT TTGCCGGCTT CACGCAGGCC
GAGGTGAAGA CCCTGCGCGG CCTCCTGCGG CGCGCGCTCG ACAACGGCAC CGACGGCGCG
CGGATGCGCC CCTCCGGTGC CTGA
 
Protein sequence
MCESVGYLLG RAKTALSMAI EQEVTLMDVT HSQASCLMLL ANGRCQTATD LGRELNTDIG 
SLTRMLSRME KRGLIERMRS ESDRRVVHLA LTDAGRTLAE RMPAIYTQVL NRFFAGFTQA
EVKTLRGLLR RALDNGTDGA RMRPSGA