| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1246 |
|---|
| Symbol | iolG |
|---|
| ID | 1220069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1321305 |
|---|
| End bp | 1322318 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637237623 |
|---|
| Product | putative oxidoreductase myo-inositol 2-dehydrogenase signal peptide protein |
|---|
| Protein accession | NP_519367 |
|---|
| Protein GI | 17545965 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.405196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGC AAATTGGGGT GATCGGCTGC GGCGCGATCG GCCAGGACCA CATCCGGCGG
CTGACGCGCA CGTTGTCGGG CGCGCGCGTG GTGGCCGTGA CCGACATCGA TCCGACGCAG
GCACACGCCG CCGTGGCGAA TCACGGCCTG AATGCCGAGG TGTACGCGAA CGGCGGCGAT
CTGATCGAGG CGCCGGACGT GCAGGCGGTG CTGGTCACGT CGTGGGGGCC GACGCACGAG
GAATTTGTCC TGAAGGCGAT CGCGCAAGGC AAGCCGGTGT TCTGCGAGAA GCCGCTGGCG
GTGACCGCCG ACGGTTGCAT GCGGATCGTC GCGGCCGAGC AGGCGCACGG CAGCAGGCTG
GTGCAGGTGG GCTTCATGCG CCCATACGAC GCCGGCTATC GTGCGCTCAA GCAGGTGATC
GACAGCGGCA CGATCGGCGC ACCGCTGATG CTGCATTGCG CGCACCGCAA CCCGTCGGTC
GGCGACCGCT ACATGACCGA CATGGCGATC ACCGACACGC TGATCCACGA ACTCGACGTG
CTGCGCTGGC TGACCGGCGA CGACTATGTC AGCGCGCAGG TCGTCTATCC GAGGAAGACG
CGCCACGCGT CTTCGCATCT CGCCGATCCG CAGATCGTGC TGCTGGAGAC GGCGCAGGGC
GTGCGCATCG ACGTGGAGAT TTTCGTCAAC TGCCAGTATG GCTACGACAT CCAGTGCGAG
GTGGTTGGCG AGAACGGGAT TGCCACGCTG CCGGACCCGC AGGCGGTGTC GCTCAAACAT
GCGGCCAGGC ATGCGATCGC GATCCTGACC GATTGGAAGG ACCGCTTCAT CGCCGCGTAC
GACATCGAGC TGCAGGCCTT CATCGATGGC GTGCAAGGGG GCGCATTGAC CGGCCCATCG
GCGTGGGATG GCTATGCCGC GGCGGTTGCC GCCGACGCCT GCGTGCGGGC ACAGAAGAGC
GGCGCGATCG AGCGCATCGA GATGGCGGCG AGGCCGGCGT TCTATCGTGG CTGA
|
|---|
| Protein sequence | MTLQIGVIGC GAIGQDHIRR LTRTLSGARV VAVTDIDPTQ AHAAVANHGL NAEVYANGGD
LIEAPDVQAV LVTSWGPTHE EFVLKAIAQG KPVFCEKPLA VTADGCMRIV AAEQAHGSRL
VQVGFMRPYD AGYRALKQVI DSGTIGAPLM LHCAHRNPSV GDRYMTDMAI TDTLIHELDV
LRWLTGDDYV SAQVVYPRKT RHASSHLADP QIVLLETAQG VRIDVEIFVN CQYGYDIQCE
VVGENGIATL PDPQAVSLKH AARHAIAILT DWKDRFIAAY DIELQAFIDG VQGGALTGPS
AWDGYAAAVA ADACVRAQKS GAIERIEMAA RPAFYRG
|
|---|
| |