| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1233 |
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| Symbol | |
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| ID | 1220056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1304554 |
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| End bp | 1306062 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237610 |
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| Product | transporter transmembrane protein |
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| Protein accession | NP_519354 |
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| Protein GI | 17545952 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0759006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA CAGCGCAACC CGCCGATGCC CAGCCGGGCG CGGCGCACGG CAGCCGTCTC
TACAACGACG ATCTGGCGCC GACCGGGGCA GCGCAGCGCA CCTGGAAGTG GTATCACTTC
GCGGCGCTGT GGGTCGGCAT GGTGATGAAC ATCGCCTCGT ACATGCTGGC GGCCGGACTG
ACGGAGCAGG GCATGTCGCC GTGGCAGGCG GTGCTGACGG TGTTGCTGGG CAACGCCATC
GTGCTGGTGC CGATGTTGCT GATCGGCCAT GCGGGGGCCA AGCACGGCAT TCCGTACGCG
GTGCTGGTGC GCACCTCGTT CGGCACGCAG GGGGCGAAGC TGCCGGCGCT GCTGCGCGCC
ATCGTCGCGT GCGGCTGGTA TGGCATCCAG ACCTGGCTGG GCGGCAGCGC CATCCATACG
CTGCTCAACA TCCTGACCGG CAATGCGCTG CACGGTGCGC CGCTGCCGCT GCTGGACATC
TCCGTCGCAC AGCTGGCCTG CTTCCTGCTG TTCTGGGCGC TGCAGCTGTA CTTCATCGTG
CACGGCACTG ACTCGATCCG CTGGCTGGAG AGCTGGTCGG CGCCGATCAA GATCGTGATG
TGCATCGCGC TGGTGTGGTG GGTCACCGCG AAGGCGGGCG GGGTCGGCTC GATGCTGTCG
GCGCCGTCGC AGTTCACGGC GGGCGGCAAG AAGGCCGGGC TGTTCTGGGC GACCTTCTGG
CCGAGCCTGA CGGCGATGGT CGGCTTCTGG GCGACGCTGG CGCTGAACAT TCCGGACTTC
ACACGCTTCG CCAGATCGCA GCGGGACCAG GTGGTGGGCC AGTCGATCGG GCTGCCGGTG
CCGATGGCGC TGCTGTCGGT GATCTCGGTG GTGGTGACCT CGGCCACGGT GGTGATCTAC
GGCCAGGCGG TCTGGGACCC GATCGACCTG ACCAGCCGCA TGACGGGCAT CGGCGTGGGC
ATCGCGCTGG TGATCCTGAC GCTGGACACC ATGTGCTGCA ACCTGGCCGC CAACCTGGTG
GGGCCGGCCT ACGATTTCTC CAGCCTGTGG CCGAAGGGCA TCTCGTACAA GACGGGCGGG
CTCATCACCG CGACCATCGC CATCGTGATG ATGCCGTGGA AGATCCTGGC CACCACGCAG
GGCTACATCT TCACGTGGCT GGTCGGCTAT TCGGCGCTGC TGGGGCCGGT GGCGGGGATC
ATGATGGTCG ACTACCTCCT GATTCGCGGC ACGCGGCTCG AGCCACGCGC GCTGTTCGAC
GAGCGCGGCG AGTATGCCTA CACCGGCGGC TGGAACCTCG GCGCGGTGGC GGCGCTGGCG
GTGGGCGTGC TGCCCAATCT GCCCGGCTTT CTGCATACCG CGTTTCCGGC GTCGTTCCCG
AACGTGCCGG CGTTCTTCAA TACGCTCTAC ACCTATGCGT GGTTCGTCGG GCTGGTGCTG
GCGTCCATTG TCTATGGCGC GTGGATGAAG CTGCGCGGCA GTCCGCGTGC GCGCGTGGCA
AGCGCCTGA
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| Protein sequence | MKPTAQPADA QPGAAHGSRL YNDDLAPTGA AQRTWKWYHF AALWVGMVMN IASYMLAAGL
TEQGMSPWQA VLTVLLGNAI VLVPMLLIGH AGAKHGIPYA VLVRTSFGTQ GAKLPALLRA
IVACGWYGIQ TWLGGSAIHT LLNILTGNAL HGAPLPLLDI SVAQLACFLL FWALQLYFIV
HGTDSIRWLE SWSAPIKIVM CIALVWWVTA KAGGVGSMLS APSQFTAGGK KAGLFWATFW
PSLTAMVGFW ATLALNIPDF TRFARSQRDQ VVGQSIGLPV PMALLSVISV VVTSATVVIY
GQAVWDPIDL TSRMTGIGVG IALVILTLDT MCCNLAANLV GPAYDFSSLW PKGISYKTGG
LITATIAIVM MPWKILATTQ GYIFTWLVGY SALLGPVAGI MMVDYLLIRG TRLEPRALFD
ERGEYAYTGG WNLGAVAALA VGVLPNLPGF LHTAFPASFP NVPAFFNTLY TYAWFVGLVL
ASIVYGAWMK LRGSPRARVA SA
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