| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1206 |
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| Symbol | |
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| ID | 1220028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1274662 |
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| End bp | 1275468 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237582 |
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| Product | lipoprotein NLPD/LppB-like protein |
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| Protein accession | NP_519327 |
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| Protein GI | 17545925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.630097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTC CAAGCCCCGC ACGCGCCGGC CGGCTCGCTG TGGCGATGGT GTCGGCCGCA
CTGCTGGCGG CTTGCGCATC CTCCGGCAAC CAGGCGCCCG TCCTCGATCG CACGTCGCGT
GCGGGCAGTG CGCCCGCCGC GCCGCTGGAA CCGCCTCCGC CCGGCTACTA TCGGGTCAAG
CGTGGCGATA CGCTCTACAG CATTGCGCTA CGCAACGGCC AGGCGCCGCG CGATCTCGTG
ACGTGGAACA ACATCCCCAA CCCGAACCAG ATCGAAGTCG ACCAACTGAT CCGCGTGGTG
CCGCCGAATG CGGACGCCAG CGCGACCGGC GCCGTCGCGA CGCCGGTCCG CCCGCCCAAT
ACCACGACGC AGCCGATCGA TGCCGCGCCG GCCGCGACGC CGCCCGTGGT CTCGTCCGGC
GCTTCTGCCG GGGCAACGGA CGGCGCAATC GCACTGGCTT GGCCCGCGCA TGGCCAGGTG
ATCGGCCGCT TCGACGACAA GGCCAACAAG GGCATCGACA TCGGCGGCAA GCGGGGCGAC
GCGGTCACGG CTGCCGATGA CGGAAAAGTG ATCCACGTTG GACCCTTGCG TGGGTACGGG
AATCTTGTCA TCATCAAGCA CAACGATACG TTCCTGACCG CCTACGGCAA CAACGATAAG
GTTCTGGTCA CCGAGCAATC CACGGTCAAG AAAGGGCAGA AGATCGCCGA AATGGGCAGT
ACCGATGCGG ACCGCGTGAA ACTTCACTTT GAAGTGCGCC GCAACGGTAA GCCTGTCGAT
CCGATGCGTT TCCTTCCGCC GCAATAG
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| Protein sequence | MNPPSPARAG RLAVAMVSAA LLAACASSGN QAPVLDRTSR AGSAPAAPLE PPPPGYYRVK
RGDTLYSIAL RNGQAPRDLV TWNNIPNPNQ IEVDQLIRVV PPNADASATG AVATPVRPPN
TTTQPIDAAP AATPPVVSSG ASAGATDGAI ALAWPAHGQV IGRFDDKANK GIDIGGKRGD
AVTAADDGKV IHVGPLRGYG NLVIIKHNDT FLTAYGNNDK VLVTEQSTVK KGQKIAEMGS
TDADRVKLHF EVRRNGKPVD PMRFLPPQ
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