| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1190 |
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| Symbol | |
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| ID | 1220012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1255954 |
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| End bp | 1259487 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637237566 |
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| Product | hypothetical protein |
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| Protein accession | NP_519311 |
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| Protein GI | 17545909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC ACGCCTACGA ACGCGACGGC GCGCCGGTCT CGCCCGAGGC CTTCTCGCGC
GCGGCCTGCG ACCCGCTGCG CTCGGTGGTG GTGGAGGCTT GCGCCGGCAG CGGCAAGACG
TGGCTGCTGG TCACACGCAT GCTGCGGCTG CTGCTGGCGG GCGCGGCGCC CTCCGACATC
CTTGCCATCA CCTTCACGCG CAAGGCGGCC GAAGAGATGC GCCAGCGCCT GCTCGACAGC
CTCGCCCAGC TGGCCGGCGC CGACGATGCG GCCGTGGTGC GCGAGCTGGT GGCTCGCACC
GTCGACGAAC GCGAGGCGCC GGGGCTGGTC GCCGTGGCGC GCGGGCTGTA TGGGCGGGTG
CTGGAGTCGC CGTCGCGCAT GGCGATCGAC ACGTTCCACG GCTGGTTCGG CGGTCTGCTG
CGCGGGGCGC CGCTGTCGTC GGGCGTGCCG CAGGGCGCCT CGCTGCGCGA AGACGCCGGC
CGCCTGCGCC GCGAGGCCTG GGCGCCGTTC TGGCGCCGCC TGCTGGCCGA AGAGCATGCC
GAACTGCGCG CCGCCTATGA CACGCTGGTC GACCTGGTGG GCGATTTCCA GGCCGGCCGC
CTGCTCGACG CGATGTTTGC GCAGCGCAGC GACTGGTGGG CCTACAAGGC GCAGGCGGGC
GCCCACCCGC TGGGCCCGCT CGATGACCTG CTCGGCGACG ACGCCCATAC CGATCCGCTA
ATTGAGGCGC TGCAGGATGC TGCGCTGCTG GCCGACATGC TGCGCGTGTC GGGCTGGCTG
GGGCAGGGCG GGGCGGCCGA GGGCAAGCGC GCCGTGCAGA TCGAGACCGC GGTGACGGCG
GCACGCGCGC TCGATCTGTC GGATGCGGCC GCGCGCCGCC ACGCGTTCGA GGCGCTGTTC
ACCGCATTCC ATACGCAGGC CGGCAAGCCG CGCGCCTGCA AGCCCACCAA GGCCCTGGTC
AAGGCCATCG GCGAAGACGC CGCGCAGACG CTGGCCGACC TGCACGCCGT GCTGTGCGAG
GCCCTGGCCG TCTACCAAGC GCGCCGCCAC GAGAGCCGCG TGCGCGCCAT CAACGCCGCG
CTGTTCACGC TCGGCGATGC GCTGATCGAG CGCTACCAGG CCTACAAGCG CCAGGCGCGC
GCGATGGACT TCACCGACCT CGAATGGGAA GCCGCCCGCC TGATGCGCGA CGAGGACACC
GCCGCCTATC TGCAGGTGCG GCTGGACGCG CGCTACAAGC ACCTGCTGCT CGACGAGTTC
CAGGACACCA ACCCGATGCA GTGGCGCATC CTGCAAGGAT GGCTGCGCGG GTACGAGGGC
ACGGGCACGC GGCCGACGGT GTTCCTGGTG GGCGACCCGA AGCAGTCGAT CTACCGCTTC
CGCCGCGCCG ACGCGCGCCT GTTCGAGGCC GCACGCGACA TGCTCGTCGC CGCGTTCGAC
GCCACCGTGC TGCGCACCAA CCGCACGCGC CGCAACGCGC CGGCCGTGCT GGAGTGGGTC
AACGCCGTCT TCCTGCTGGC GCGCGCGCGG GGCGATTACC CCATCTACGC CGAGCAGAGC
ACCGCCGTCG ATGCGCCCGT CGGCCGGGCC CTGCTGCTGC CGCTTGTGCC GGTGCCGGAG
GCCGCGCAGG CTGACGAGAC CGCGCCGCGC GATTCGCTGA CCGAGCCGCG CGAGGAGGCC
GGCGATTCGC AGCGCTACGA CGAGGGCCGA CAGGTTGCCG CCTGCCTGCG TGCGCTGCAC
GCGGGCGAAC GCGTGCGCGA GAACGGCGCC GAGCGTCCCG TGCGCTGGAG CGATTTCCAG
CTGCTCGTGC GCCGCAAGCG CTACCTGGCC GACTATGAGC GCGCCCTGCG CGATGCCGGC
GTGCCTTACC TGAGCCCGCG CCGCGGCGGC CTGCTGGCGA CGCTCGAGGC GCTGGACCTG
TGCGCGCTGC TCGATTTCCT GATGACGCCG CAGGCCGACC TGCCGCTCGC GCACGTGCTG
CGCAGCCCGA TCTTCGCCGT CACCGATGAC GACCTGATCG CGCTGGCGCA GGCCGGCGAG
GGCGCGTCCG CGCCGACGTG GTGGGAGCGG CTGGCGGCGC TCGCCGACCG GCCGCACGCC
GCCGCGCAGT GGCGCCGCGC GCATCGGCTG CTGTCGCGCT GGCTGGCGGT GGCGCCCACG
CTGCCGGTGC ACGATCTGCT CGACCACATC GTCTATACCG GTGAGCTCAA GCGCCGCTAT
GCCGAGCGGG TCCCCGAGGC CAACCGCGAG CAGGCGCTGG CCAACCTCGA TGCCTTCCTC
AAGCTCGCGC TCGACCTGGA CGGCGGCCGT TACCCGAGTC TGCCGAAGTT CATGGCCGAG
CTGCGCGCGA TCCGCCAGGG CGATGAAGAG GAAAGCCCCG ACGAAGGCGT GCAGGGTGAT
GCCGCCGAGG CGCCGGACGC CATCGACGCC GAGCTTGCCA GCGAGGGGTT GGACGCCGTG
CAGATCCTGA CCGTGCACGC GTCGAAAGGG TTGGAGGCGC CGTTCGTCGT GCTGCTTGAC
AGCCACCATA GCGATACCCG GGCCGACACC GTGGGCATCC TGATCGACTG GCCGCCCGGC
GCCGAGGCCC CGGCGCATTT CTCTGCCTTC GGCAAGGCCG CCGAGCGCGG CCGCGCGCGC
GATCCGCTGT TCGCGCAGGA AGCCACGCTG GCCGAGCGCG AGAACTGGAA CCTGCTCTAC
GTGGCGATGA CGCGTGCGCG GCAGGCGCTG ATCGTCTCCG GCGTCGCCAA CAAGCGCGAC
GGCGCGGCGG CTCAGGCCGT GGACGAAGGC GACGTGCCGG ACGTCGACGG CAGCGCGAGC
TGGTACACCC TGCTGGCGAC GGCCGGCGCC GCCACGCCCG CGCCGGTGGA GGCGGCCGCC
GGCGCGGGCG GCGCGGACCA CGCCGCGTCG CAGGCTGTCG CGTACCACGA CTTCCGCGTG
CCGCTGACGG TCACGGTGCG GATCGGGGGC GCCGTCGAGC GTGTCGCCGA TGCGCCGGAC
ACCGCCGACG CGATCTTTGA CCAGGGCGCC GTCGCGCAAG GCGAACTGCT GCATGCCGTC
CTGGAGCGGT TGACGCGCCA TGGCAAGCCG GAGCAGGTGC CGGACGCCGC CGCCATCGCC
CGCTGGTTCG GCGCGACCGG CATCACCGAC GCGGACGCCG CGCGCGCGAC CGAGGCGGTG
CGCCGCATGC TGGCCGCCGA AGCGCTGGCG CACGTGTTCG ACCCCGCACG CTTCGATGTC
GCGCACAACG AAGTCGAACT CTTCAGCCCG GACGGCGCGC TGCTGCGCAT CGACCGGCTG
ATCGAGCGGG GTGATGAAGT GCTGGTGGTC GACTACAAGC TGCGTCTGCT GCCGGTCGAG
CGCGCGGCCT ATGCCGATCA GTTGCGCGGC TACGCGGCCG CCGTCGCGCC GATCTATCCG
GGGCGCGCGG TGCGTGCCGG CGTGGCGACC GCGCAGGGCG AGTGGATCGA TCTGCAAGCG
TTGCCCAAGC CGGCCGAAGC GGCGCGCGAC GATGCCCAGG GCGCGCTGTT CTGA
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| Protein sequence | MSDHAYERDG APVSPEAFSR AACDPLRSVV VEACAGSGKT WLLVTRMLRL LLAGAAPSDI
LAITFTRKAA EEMRQRLLDS LAQLAGADDA AVVRELVART VDEREAPGLV AVARGLYGRV
LESPSRMAID TFHGWFGGLL RGAPLSSGVP QGASLREDAG RLRREAWAPF WRRLLAEEHA
ELRAAYDTLV DLVGDFQAGR LLDAMFAQRS DWWAYKAQAG AHPLGPLDDL LGDDAHTDPL
IEALQDAALL ADMLRVSGWL GQGGAAEGKR AVQIETAVTA ARALDLSDAA ARRHAFEALF
TAFHTQAGKP RACKPTKALV KAIGEDAAQT LADLHAVLCE ALAVYQARRH ESRVRAINAA
LFTLGDALIE RYQAYKRQAR AMDFTDLEWE AARLMRDEDT AAYLQVRLDA RYKHLLLDEF
QDTNPMQWRI LQGWLRGYEG TGTRPTVFLV GDPKQSIYRF RRADARLFEA ARDMLVAAFD
ATVLRTNRTR RNAPAVLEWV NAVFLLARAR GDYPIYAEQS TAVDAPVGRA LLLPLVPVPE
AAQADETAPR DSLTEPREEA GDSQRYDEGR QVAACLRALH AGERVRENGA ERPVRWSDFQ
LLVRRKRYLA DYERALRDAG VPYLSPRRGG LLATLEALDL CALLDFLMTP QADLPLAHVL
RSPIFAVTDD DLIALAQAGE GASAPTWWER LAALADRPHA AAQWRRAHRL LSRWLAVAPT
LPVHDLLDHI VYTGELKRRY AERVPEANRE QALANLDAFL KLALDLDGGR YPSLPKFMAE
LRAIRQGDEE ESPDEGVQGD AAEAPDAIDA ELASEGLDAV QILTVHASKG LEAPFVVLLD
SHHSDTRADT VGILIDWPPG AEAPAHFSAF GKAAERGRAR DPLFAQEATL AERENWNLLY
VAMTRARQAL IVSGVANKRD GAAAQAVDEG DVPDVDGSAS WYTLLATAGA ATPAPVEAAA
GAGGADHAAS QAVAYHDFRV PLTVTVRIGG AVERVADAPD TADAIFDQGA VAQGELLHAV
LERLTRHGKP EQVPDAAAIA RWFGATGITD ADAARATEAV RRMLAAEALA HVFDPARFDV
AHNEVELFSP DGALLRIDRL IERGDEVLVV DYKLRLLPVE RAAYADQLRG YAAAVAPIYP
GRAVRAGVAT AQGEWIDLQA LPKPAEAARD DAQGALF
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