| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1145 |
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| Symbol | dapA |
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| ID | 1219960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1200763 |
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| End bp | 1201647 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237514 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | NP_519266 |
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| Protein GI | 17545864 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0950083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA TTTCCGGCAG TCTCGTCGCC ATCGTCACGC CCATGCACGA GGACGGCAGC
CTAGATTTCC CGTCGTTGCG CAGCCTGATC GACTGGCATA TCGCCGAAGG CACGGACGGC
ATCGTCATCG TCGGGACCAG CGGTGAATCG CCGACGGTGT CGGTGGACGA GCACCGGGAG
CTGATCCGCG TGACGGTCGA GCAGGTCAAC AAGCGCATTC CGGTCATTGC CGGCACCGGC
GGCAATTCCA CCACCGAAGC CGTGGAGCTG ACGGCCTACG CCAAGTCGGT GGGCGCCGAT
GCCTCGCTGC AGGTCGTGCC GTACTACAAC AAGCCGACGC AGGAGGGCAT GTACCTGCAC
TTCCGCAAGG TGGCGGAGTC GGTGGACCTG CCGGTGATCC TGTACAACGT GCCTGGCCGC
ACCGTCGCCG ATATGTCGGT CGACACGATG CTGCGCCTCG CGCAGGTGCC CGGCGTGATG
GGCGTCAAGG AGGCGACCGG CAATATCGAC CGTGCCGCCC AGTTGATCAA GGCCGCGCCG
GCGTCCTTCA AGATTTACAG CGGGGACGAC CCGACCGCCG TCGCGCTGAT GCTGCTGGGC
GGTCACGGCA ACATCTCCGT GACGGCCAAC GTGGCGCCGC GCGCCATGCA TGACTTGTGC
GCCGCCGCCA TGCGCGGCGA TGTGGAGACG GCCCGCCGCA TTCACATGCA GCTGCTGTCG
GTGCACAAGA ACCTGTTCGT GGAATCGAAC CCGATTCCCG TCAAGTGGGC CCTGCAAGCC
ATGGGCAAGA TGGCCGGCGG CATCCGCCTG CCGTTGACGC CGCTGGCGGC CCAGTATCAA
GAGGTGGTGC GCGCATCCTT GCAGGATGCC GGACTGCTCT CCTGA
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| Protein sequence | MTQISGSLVA IVTPMHEDGS LDFPSLRSLI DWHIAEGTDG IVIVGTSGES PTVSVDEHRE
LIRVTVEQVN KRIPVIAGTG GNSTTEAVEL TAYAKSVGAD ASLQVVPYYN KPTQEGMYLH
FRKVAESVDL PVILYNVPGR TVADMSVDTM LRLAQVPGVM GVKEATGNID RAAQLIKAAP
ASFKIYSGDD PTAVALMLLG GHGNISVTAN VAPRAMHDLC AAAMRGDVET ARRIHMQLLS
VHKNLFVESN PIPVKWALQA MGKMAGGIRL PLTPLAAQYQ EVVRASLQDA GLLS
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